6AKS

Cryo-EM structure of CVA10 mature virus


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structures of Coxsackievirus A10 unveil the molecular mechanisms of receptor binding and viral uncoating.

Zhu, L.Sun, Y.Fan, J.Zhu, B.Cao, L.Gao, Q.Zhang, Y.Liu, H.Rao, Z.Wang, X.

(2018) Nat Commun 9: 4985-4985


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
VP1
A
297Coxsackievirus A10Mutation(s): 0 
Find proteins for W0G0K3 (Coxsackievirus A10)
Go to UniProtKB:  W0G0K3
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
VP2
B
255Coxsackievirus A10Mutation(s): 0 
Find proteins for A0A0C5AZ80 (Coxsackievirus A10)
Go to UniProtKB:  A0A0C5AZ80
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
VP3
C
240Coxsackievirus A10Mutation(s): 0 
Find proteins for A0A0C5AWF6 (Coxsackievirus A10)
Go to UniProtKB:  A0A0C5AWF6
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
VP4
D
69Coxsackievirus A10Mutation(s): 0 
Find proteins for Q75Q92 (Coxsackievirus A10)
Go to UniProtKB:  Q75Q92
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SPH
Query on SPH

Download SDF File 
Download CCD File 
A
SPHINGOSINE
C18 H37 N O2
WWUZIQQURGPMPG-MSOLQXFVSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
Software Package:
Software NamePurpose
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2019-01-16
    Type: Initial release