6A67

Crystal structure of influenza A virus H5 hemagglutinin globular head in complex with the Fab of antibody FLD21.140


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.33 Å
  • R-Value Free: 0.235 
  • R-Value Work: 0.197 
  • R-Value Observed: 0.199 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.4 of the entry. See complete history



Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
FLD21.140 Heavy ChainA [auth H],
C
226Homo sapiensMutation(s): 0 
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
FLD21.140 Light ChainB [auth L],
D
217Homo sapiensMutation(s): 0 
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
HemagglutininE [auth B],
F [auth A]
230Influenza A virus (A/Thailand/1(KAN-1)/2004(H5N1))Mutation(s): 0 
UniProt
Find proteins for Q6Q794 (Influenza A virus)
Explore Q6Q794 
Go to UniProtKB:  Q6Q794
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UniProt GroupQ6Q794
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Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.33 Å
  • R-Value Free: 0.235 
  • R-Value Work: 0.197 
  • R-Value Observed: 0.199 
  • Space Group: P 42 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 168.106α = 90
b = 168.106β = 90
c = 147.188γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling
PHASERphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of ChinaChina81530065
National Natural Science Foundation of ChinaChina81661128042
National Natural Science Foundation of ChinaChina31470751
National Natural Science Foundation of ChinaChinaU1405228
Ministry of Science and Technology (China)China2016YFD0500307
Ministry of Science and Technology (China)China2012ZX10001-004
Ministry of Science and Technology (China)China2012ZX10001-006
Ministry of Science and Technology (China)China2012ZX10001-009
Ministry of Science and Technology (China)China2017ZX10201-101
Ministry of Science and Technology (China)China2014CB542500-03

Revision History  (Full details and data files)

  • Version 1.0: 2018-08-29
    Type: Initial release
  • Version 1.1: 2018-09-19
    Changes: Data collection, Database references
  • Version 1.2: 2018-11-21
    Changes: Data collection, Database references
  • Version 1.3: 2020-07-29
    Type: Remediation
    Reason: Carbohydrate remediation
    Changes: Data collection, Derived calculations, Structure summary
  • Version 1.4: 2023-11-22
    Changes: Data collection, Database references, Refinement description, Structure summary