6N3T

Crystal structure of MmpL3 from Mycobacterium smegmatis complexed with phosphatidylethanolamine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.787 Å
  • R-Value Free: 0.284 
  • R-Value Work: 0.250 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal Structure of a membrane protein

Su, C.-C.Yu, E.W.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Membrane protein, MmpL family protein
A
779Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)Mutation(s): 0 
Find proteins for A0QP27 (Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155))
Go to UniProtKB:  A0QP27
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
L9Q
Query on L9Q

Download SDF File 
Download CCD File 
A
(1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate
1-stearoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine
C41 H80 N O8 P
JQKOHRZNEOQNJE-VYCVAHKRSA-N
 Ligand Interaction
LMT
Query on LMT

Download SDF File 
Download CCD File 
A
DODECYL-BETA-D-MALTOSIDE
C24 H46 O11
NLEBIOOXCVAHBD-QKMCSOCLSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.787 Å
  • R-Value Free: 0.284 
  • R-Value Work: 0.250 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 80.814α = 90.00
b = 129.457β = 90.00
c = 154.591γ = 90.00
Software Package:
Software NamePurpose
SOLVEphasing
RESOLVEphasing
PDB_EXTRACTdata extraction
PHENIXrefinement
HKL-2000data reduction
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2018-11-16 
  • Released Date: 2019-02-06 
  • Deposition Author(s): Su, C.-C.

Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical SciencesUnited States--

Revision History 

  • Version 1.0: 2019-02-06
    Type: Initial release