5Z9W

Ebola virus nucleoprotein-RNA complex

  • Classification: VIRAL PROTEIN
  • Organism(s): synthetic construct
  • Expression System: Homo sapiens

  • Deposited: 2018-02-05 Released: 2018-10-24 
  • Deposition Author(s): Sugita, Y., Matsunami, H., Kawaoka, Y., Noda, T., Wolf, M.
  • Funding Organization(s): the Ministry of Education, Culture, Science, Sports, and Technology; Japan Science and Technology Agency; Japan Agency for Medical Research and Development; Japan Society for the Promotion of Science; Daiichi Sankyo Foundation of Life Science 

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.6 Å
  • Aggregation State: HELICAL ARRAY 
  • Reconstruction Method: HELICAL 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Cryo-EM structure of the Ebola virus nucleoprotein-RNA complex at 3.6 angstrom resolution.

Sugita, Y.Matsunami, H.Kawaoka, Y.Noda, T.Wolf, M.

(2018) Nature 563: 137-140


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Ebolavirus nucleoprotein (residues 19-406)
A
388N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 2
MoleculeChainsLengthOrganism
RNA (6-MER)R6synthetic construct
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.6 Å
  • Aggregation State: HELICAL ARRAY 
  • Reconstruction Method: HELICAL 
Software Package:
Software NamePurpose
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
the Ministry of Education, Culture, Science, Sports, and TechnologyJapan26892028
Japan Science and Technology AgencyJapanJPMJPR13L9
Japan Agency for Medical Research and DevelopmentJapan17fk0108128h0001
the Ministry of Education, Culture, Science, Sports, and TechnologyJapan16H06429
the Ministry of Education, Culture, Science, Sports, and TechnologyJapan16K21723
the Ministry of Education, Culture, Science, Sports, and TechnologyJapan16H06434
Japan Society for the Promotion of ScienceJapan--
Daiichi Sankyo Foundation of Life ScienceJapan--
Japan Agency for Medical Research and DevelopmentJapan--

Revision History 

  • Version 1.0: 2018-10-24
    Type: Initial release
  • Version 1.1: 2018-11-07
    Type: Data collection, Database references
  • Version 1.2: 2018-11-14
    Type: Data collection, Database references