5XYL | pdb_00005xyl

Solution Structure of Skp1 from Homo sapiens

PDB DOI: https://doi.org/10.2210/pdb5XYL/pdb

Classification: CELL CYCLE
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2017-07-09 Released: 2018-07-11
Deposition Author(s): Shukla, V.K., Kachariya, N.N., Bhattacharya, A., Dantu, S.C., Kumar, A.
Funding Organization(s): Department Of Science & Technology

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 10
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

Validation slider image for 5XYL

This is version 1.2 of the entry. See complete history.

Literature

Structural and dynamics insight of the recognition of Fbox protein by Skp1

Shukla, V.K., Kacharia, N.N., Bhattacharya, A., Dantu, S.C., Kumar, A.

To be published.

Macromolecule Content

Total Structure Weight: 18.68 kDa
Atom Count: 1,308
Modeled Residue Count: 163
Deposited Residue Count: 163
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
S-phase kinase-associated protein 1	A	163	Homo sapiens	Mutation(s): 0 Gene Names: SKP1, EMC19, OCP2, SKP1A, TCEB1L
UniProt & NIH Common Fund Data Resources
Find proteins for P63208 (Homo sapiens) Explore P63208 Go to UniProtKB: P63208
PHAROS: P63208 GTEx: ENSG00000113558
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P63208
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 10
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2018-07-11

Deposition Author(s):

Kachariya, N.N.

Bhattacharya, A.

Funding Organization	Location	Grant Number
Department Of Science & Technology	India	EMR/2016/002798, SR/SO/BB-0022/2012

Revision History (Full details and data files)

Version 1.0: 2018-07-11
Type: Initial release
Version 1.1: 2023-06-14
Changes: Data collection, Database references, Other
Version 1.2: 2024-05-29
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.