5X06

DNA replication regulation protein


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.24 Å
  • R-Value Free: 0.265 
  • R-Value Work: 0.226 
  • R-Value Observed: 0.228 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

Replication regulation protein

Kim, J.Cho, Y.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
DNA polymerase III subunit betaA, B, C, D386Escherichia coli O157:H7Mutation(s): 0 
Gene Names: dnaNZ5192ECs4636
EC: 2.7.7.7
UniProt
Find proteins for P0A990 (Escherichia coli O157:H7)
Explore P0A990 
Go to UniProtKB:  P0A990
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP0A990
Protein Feature View
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
DnaA regulatory inactivator HdaE, F, G, H253Escherichia coli O157:H7Mutation(s): 0 
Gene Names: hdaZ3759ECs3358
UniProt
Find proteins for P69933 (Escherichia coli O157:H7)
Explore P69933 
Go to UniProtKB:  P69933
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP69933
Protein Feature View
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.24 Å
  • R-Value Free: 0.265 
  • R-Value Work: 0.226 
  • R-Value Observed: 0.228 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 102.112α = 90
b = 149.542β = 90
c = 200.78γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling
PHENIXphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2017-01-20 
  • Released Date: 2018-01-24 
  • Deposition Author(s): Kim, J., Cho, Y.

Funding OrganizationLocationGrant Number
National Research Foundation of Korea funded by the Korea GovernmentKorea, Republic OfNRF-2015R1A2A1A05001694
National Research Foundation of Korea funded by the Korea GovernmentKorea, Republic Of2012054226
National Research Foundation of Korea funded by the Korea GovernmentKorea, Republic Of20120008833

Revision History  (Full details and data files)

  • Version 1.0: 2018-01-24
    Type: Initial release