5WUF

Structural basis for conductance through TRIC cation channels


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.274 
  • R-Value Work: 0.240 
  • R-Value Observed: 0.242 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structural basis for conductance through TRIC cation channels.

Su, M.Gao, F.Yuan, Q.Mao, Y.Li, D.L.Guo, Y.Yang, C.Wang, X.H.Bruni, R.Kloss, B.Zhao, H.Zeng, Y.Zhang, F.B.Marks, A.R.Hendrickson, W.A.Chen, Y.H.

(2017) Nat Commun 8: 15103-15103

  • DOI: https://doi.org/10.1038/ncomms15103
  • Primary Citation of Related Structures:  
    5WUC, 5WUD, 5WUE, 5WUF

  • PubMed Abstract: 

    Mammalian TRICs function as K + -permeable cation channels that provide counter ions for Ca 2+ handling in intracellular stores. Here we describe the structures of two prokaryotic homologues, archaeal SaTRIC and bacterial CpTRIC, showing that TRIC channels are symmetrical trimers with transmembrane pores through each protomer. Each pore holds a string of water molecules centred at kinked helices in two inverted-repeat triple-helix bundles (THBs). The pores are locked in a closed state by a hydrogen bond network at the C terminus of the THBs, which is lost when the pores assume an open conformation. The transition between the open and close states seems to be mediated by cation binding to conserved residues along the three-fold axis. Electrophysiology and mutagenesis studies show that prokaryotic TRICs have similar functional properties to those of mammalian TRICs and implicate the three-fold axis in the allosteric regulation of the channel.


  • Organizational Affiliation

    State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Putative membrane protein249Colwellia psychrerythraea 34HMutation(s): 0 
Gene Names: CPS_4741
Membrane Entity: Yes 
UniProt
Find proteins for Q47UY7 (Colwellia psychrerythraea (strain 34H / ATCC BAA-681))
Explore Q47UY7 
Go to UniProtKB:  Q47UY7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ47UY7
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.274 
  • R-Value Work: 0.240 
  • R-Value Observed: 0.242 
  • Space Group: H 3 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 91.312α = 90
b = 91.312β = 90
c = 252.799γ = 120
Software Package:
Software NamePurpose
PHENIXrefinement
Aimlessdata scaling
PDB_EXTRACTdata extraction
XDSdata reduction
PHENIXphasing

Structure Validation

View Full Validation Report



Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2017-08-09
    Type: Initial release