5WPH

Crystal structure of ArsN, N-acetyltransferase with substrate AST from Pseudomonas putida KT2440


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.19 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.180 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Arsinothricin, an arsenic-containing non-proteinogenic amino acid analog of glutamate, is a broad-spectrum antibiotic.

Nadar, V.S.Chen, J.Dheeman, D.S.Galvan, A.E.Yoshinaga-Sakurai, K.Kandavelu, P.Sankaran, B.Kuramata, M.Ishikawa, S.Rosen, B.P.Yoshinaga, M.

(2019) Commun Biol 2: 131-131


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Phosphinothricin N-acetyltransferase
A, B, C, D, E, F
207Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440)Mutation(s): 0 
Find proteins for Q88LK7 (Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440))
Go to UniProtKB:  Q88LK7
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
BLJ
Query on BLJ

Download SDF File 
Download CCD File 
A, B
(2S)-2-amino-4-[hydroxy(methyl)arsoryl]butanoic acid
C5 H12 As N O4
CXTQPLOKUBDLTK-BYPYZUCNSA-N
 Ligand Interaction
NA
Query on NA

Download SDF File 
Download CCD File 
A, B, C, D
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.19 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.180 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 185.273α = 90.00
b = 141.735β = 90.59
c = 54.551γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data scaling
PHASERphasing
REFMACrefinement
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of Environmental Health SciencesUnited StatesR37 GM55425

Revision History 

  • Version 1.0: 2018-10-10
    Type: Initial release
  • Version 1.1: 2019-04-24
    Type: Data collection, Database references, Structure summary
  • Version 1.2: 2019-05-01
    Type: Data collection, Database references