5W4X

Truncated hUGDH


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.234 
  • R-Value Work: 0.187 

wwPDB Validation 3D Report Full Report


This is version 2.3 of the entry. See complete history

Literature

The entropic force generated by intrinsically disordered segments tunes protein function.

Keul, N.D.Oruganty, K.Schaper Bergman, E.T.Beattie, N.R.McDonald, W.E.Kadirvelraj, R.Gross, M.L.Phillips, R.S.Harvey, S.C.Wood, Z.A.

(2018) Nature 563: 584-588


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
UDP-glucose 6-dehydrogenase
A, B, C
466Homo sapiensMutation(s): 0 
Gene Names: UGDH
EC: 1.1.1.22
Find proteins for O60701 (Homo sapiens)
Go to Gene View: UGDH
Go to UniProtKB:  O60701
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PG5
Query on PG5

Download SDF File 
Download CCD File 
A, B, C
1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE
C8 H18 O4
YFNKIDBQEZZDLK-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.234 
  • R-Value Work: 0.187 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 178.190α = 90.00
b = 114.066β = 116.85
c = 97.239γ = 90.00
Software Package:
Software NamePurpose
XDSdata reduction
XDSdata scaling
PHENIXrefinement
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2017-07-19
    Type: Initial release
  • Version 2.0: 2017-10-18
    Type: Advisory, Data collection, Database references, Polymer sequence, Source and taxonomy, Structure summary
  • Version 2.1: 2018-11-14
    Type: Data collection, Database references
  • Version 2.2: 2018-11-28
    Type: Data collection, Database references
  • Version 2.3: 2018-12-05
    Type: Data collection, Database references