Download MendeleyInhibitors of CamKII
Somoza, T.J., Villasenor, A.G.To be published.
5VLO
The structure of human CamKII with bound inhibitor
- PDB DOI: 10.2210/pdb5VLO/pdb
- Classification: TRANSFERASE
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2017-04-25 Released: 2017-08-23
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.05 Å
- R-Value Free: 0.226
- R-Value Work: 0.183
- R-Value Observed: 0.184
This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Calcium/calmodulin-dependent protein kinase type II subunit delta | A, B | 302 | Homo sapiens | Mutation(s): 0 Gene Names: CAMK2D, CAMKD EC: 2.7.11.17 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q13557 (Homo sapiens) Explore Q13557 Go to UniProtKB: Q13557 | |||||
PHAROS: Q13557 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q13557 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| 9EJ Query on 9EJ | C [auth A], E [auth B] | N-[(2S)-2-(diethylamino)propyl]-2-[(2S)-2-(methylcarbamoyl)azetidin-1-yl]-6-[5-(thiophen-2-yl)pyrazolo[1,5-a]pyrimidin-3-yl]pyridine-4-carboxamide C28 H34 N8 O2 S BKSPZDICBZFRLV-MBSDFSHPSA-N |  | Ligand Interaction | |
| DTT Query on DTT | D [auth A], F [auth B] | 2,3-DIHYDROXY-1,4-DITHIOBUTANE C4 H10 O2 S2 VHJLVAABSRFDPM-IMJSIDKUSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.05 Å
- R-Value Free: 0.226
- R-Value Work: 0.183
- R-Value Observed: 0.184
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 54.473 | α = 90 |
| b = 67.546 | β = 94.111 |
| c = 85.45 | γ = 90 |
| Software Name | Purpose |
|---|---|
| XDS | data reduction |
| XSCALE | data scaling |
| EPMR | phasing |
| PHENIX | refinement |
Entry History
Deposition Data
- Released Date: 2017-08-23 Deposition Author(s): Somoza, J.R., Villasenor, A.G.
Revision History (Full details and data files)
- Version 1.0: 2017-08-23
Type: Initial release - Version 1.1: 2017-09-27
Changes: Data collection
