5UR7

Crystal structure of engineered CCL20 disulfide locked dimer

  • Classification: IMMUNE SYSTEM
  • Organism(s): Homo sapiens
  • Expression System: Escherichia coli
  • Mutation(s): 

  • Deposited: 2017-02-09 Released: 2017-11-22 
  • Deposition Author(s): Getschman, A.E., Peterson, F.C., Volkman, B.F.
  • Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases; National Institutes of Health/National Institute of General Medical Sciences; National Institutes of Health/National Institute of Arthritis and Musculoskeletal and Skin Diseases 

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0004 Å
  • R-Value Free: 0.197 
  • R-Value Work: 0.160 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Protein engineering of the chemokine CCL20 prevents psoriasiform dermatitis in an IL-23-dependent murine model.

Getschman, A.E.Imai, Y.Larsen, O.Peterson, F.C.Wu, X.Rosenkilde, M.M.Hwang, S.T.Volkman, B.F.

(2017) Proc. Natl. Acad. Sci. U.S.A. 114: 12460-12465

  • DOI: 10.1073/pnas.1704958114

  • PubMed Abstract: 
  • Psoriasis is a chronic inflammatory skin disease characterized by the infiltration of T cell and other immune cells to the skin in response to injury or autoantigens. Conventional, as well as unconventional, γδ T cells are recruited to the dermis and ...

    Psoriasis is a chronic inflammatory skin disease characterized by the infiltration of T cell and other immune cells to the skin in response to injury or autoantigens. Conventional, as well as unconventional, γδ T cells are recruited to the dermis and epidermis by CCL20 and other chemokines. Together with its receptor CCR6, CCL20 plays a critical role in the development of psoriasiform dermatitis in mouse models. We screened a panel of CCL20 variants designed to form dimers stabilized by intermolecular disulfide bonds. A single-atom substitution yielded a CCL20 variant (CCL20 S64C) that acted as a partial agonist for the chemokine receptor CCR6. CCL20 S64C bound CCR6 and induced intracellular calcium release, consistent with G-protein activation, but exhibited minimal chemotactic activity. Instead, CCL20 S64C inhibited CCR6-mediated T cell migration with nominal impact on other chemokine receptor signaling. When given in an IL-23-dependent mouse model for psoriasis, CCL20 S64C prevented psoriatic inflammation and the up-regulation of IL-17A and IL-22. Our results validate CCR6 as a tractable therapeutic target for psoriasis and demonstrate the value of CCL20 S64C as a lead compound.


    Organizational Affiliation

    Department of Dermatology, Medical College of Wisconsin, Milwaukee, WI 53226.,Department of Biochemistry, Medical College of Wisconsin, Milwaukee, WI 53226; bvolkman@mcw.edu.,Department of Biochemistry, Medical College of Wisconsin, Milwaukee, WI 53226.,Department of Dermatology, Hyogo College of Medicine, Nishinomiya, Hyogo 663-8501, Japan.,Laboratory for Molecular Pharmacology, Department of Biomedical Sciences, Faculty of Health and Medical Sciences, The Panum Institute, University of Copenhagen, DK-2200 Copenhagen, Denmark.,Department of Dermatology, University of California Davis School of Medicine, Sacramento, CA 95816.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
C-C motif chemokine 20
A, B
70Homo sapiensMutation(s): 1 
Gene Names: CCL20 (LARC, MIP3A, SCYA20)
Find proteins for P78556 (Homo sapiens)
Go to Gene View: CCL20
Go to UniProtKB:  P78556
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ACT
Query on ACT

Download SDF File 
Download CCD File 
A, B
ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
 Ligand Interaction
IPA
Query on IPA

Download SDF File 
Download CCD File 
A
ISOPROPYL ALCOHOL
2-PROPANOL
C3 H8 O
KFZMGEQAYNKOFK-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0004 Å
  • R-Value Free: 0.197 
  • R-Value Work: 0.160 
  • Space Group: P 61
Unit Cell:
Length (Å)Angle (°)
a = 71.679α = 90.00
b = 71.679β = 90.00
c = 71.561γ = 120.00
Software Package:
Software NamePurpose
HKL-2000data collection
PHENIXrefinement
HKL-2000data reduction
PHASERphasing
PDB_EXTRACTdata extraction
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious DiseasesUnited StatesRO1 AI058072
National Institutes of Health/National Institute of General Medical SciencesUnited StatesRO1 GM097381
National Institutes of Health/National Institute of Arthritis and Musculoskeletal and Skin DiseasesUnited StatesRO1 AR063091

Revision History 

  • Version 1.0: 2017-11-22
    Type: Initial release
  • Version 1.1: 2017-11-29
    Type: Database references