The structure of archaeal Inorganic Pyrophosphatase in complex with pyrophosphate
Inoguchi, N., Hughes, R.C., Meehan, E.J., Ng, J.D.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Inorganic pyrophosphatase | 178 | Thermococcus thioreducens | Mutation(s): 0  Gene Names: ppa EC: 3.6.1.1 | ||
UniProt | |||||
Find proteins for H0USY5 (Thermococcus thioreducens) Explore H0USY5  Go to UniProtKB:  H0USY5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | H0USY5 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 5 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
POP Query on POP | K [auth A], S [auth B], Z [auth C] | PYROPHOSPHATE 2- H2 O7 P2 XPPKVPWEQAFLFU-UHFFFAOYSA-L | |||
MRD Query on MRD | J [auth A] | (4R)-2-METHYLPENTANE-2,4-DIOL C6 H14 O2 SVTBMSDMJJWYQN-RXMQYKEDSA-N | |||
EDO Query on EDO | G [auth A] H [auth A] I [auth A] O [auth B] P [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
CA Query on CA | D [auth A] E [auth A] F [auth A] L [auth B] M [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
NA Query on NA | T [auth B] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 100.161 | α = 90 |
b = 100.161 | β = 90 |
c = 97.801 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
HKL-2000 | data scaling |
PHENIX | phasing |
HKL-2000 | data reduction |