5TY5

Neutron structure from microgravity-grown crystals of Inorganic Pyrophosphatase from Thermococcus theoreducens


Experimental Data Snapshot

  • Method: NEUTRON DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.252 
  • R-Value Work: 0.239 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structure-function analysis of the neutron crystallographic structure of inorganic pyrophosphatase determined from microgravity-grown crystals

Inoguchi, N.Coates, L.Meilleur, F.Morris, M.L.Singhal, A.Barcena, J.Garcia-Ruiz, J.M.Pusey, M.L.Ng, J.D.

(2017) Acta Crystallogr.,Sect.A 73: 132-132


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Inorganic pyrophosphatase
A, B, C, D, E, F
178Thermococcus thioreducensMutation(s): 0 
Gene Names: ppa
EC: 3.6.1.1
Find proteins for H0USY5 (Thermococcus thioreducens)
Go to UniProtKB:  H0USY5
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
DOD
Query on DOD

Download SDF File 
Download CCD File 
A, B, C, D, E, F
DEUTERATED WATER
D2 O
XLYOFNOQVPJJNP-ZSJDYOACSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: NEUTRON DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.252 
  • R-Value Work: 0.239 
Software Package:
Software NamePurpose
LAUENORMdata scaling
HKL-2000data reduction
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Center for the Advancement of Science in Space (CASIS)United StatesGA-2013-100

Revision History 

  • Version 1.0: 2017-11-22
    Type: Initial release
  • Version 1.1: 2019-01-09
    Type: Data collection, Database references, Experimental preparation