5O4U

The flagellin of Pyrococcus furiosus


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.20 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

wwPDB Validation   3D Report Full Report


This is version 1.6 of the entry. See complete history


Literature

Structure andin situorganisation of thePyrococcus furiosusarchaellum machinery.

Daum, B.Vonck, J.Bellack, A.Chaudhury, P.Reichelt, R.Albers, S.V.Rachel, R.Kuhlbrandt, W.

(2017) Elife 6

  • DOI: https://doi.org/10.7554/eLife.27470
  • Primary Citation of Related Structures:  
    5O4U

  • PubMed Abstract: 

    The archaellum is the macromolecular machinery that Archaea use for propulsion or surface adhesion, enabling them to proliferate and invade new territories. The molecular composition of the archaellum and of the motor that drives it appears to be entirely distinct from that of the functionally equivalent bacterial flagellum and flagellar motor. Yet, the structure of the archaellum machinery is scarcely known. Using combined modes of electron cryo-microscopy (cryoEM), we have solved the structure of the Pyrococcus furiosus archaellum filament at 4.2 Å resolution and visualise the architecture and organisation of its motor complex in situ . This allows us to build a structural model combining the archaellum and its motor complex, paving the way to a molecular understanding of archaeal swimming motion.


  • Organizational Affiliation

    Max Planck Institute of Biophysics, Frankfurt, Germany.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Flagellin
A, B, C, D, E
A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P
212Pyrococcus furiosus DSM 3638Mutation(s): 0 
Membrane Entity: Yes 
UniProt
Find proteins for A0A0B4ZYM1 (Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1))
Explore A0A0B4ZYM1 
Go to UniProtKB:  A0A0B4ZYM1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0B4ZYM1
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.20 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION2.0
MODEL REFINEMENTPHENIX

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2017-07-05
    Type: Initial release
  • Version 1.1: 2017-08-02
    Changes: Data collection
  • Version 1.2: 2017-08-30
    Changes: Data collection
  • Version 1.3: 2018-03-28
    Changes: Data collection, Database references
  • Version 1.4: 2019-02-20
    Changes: Advisory, Data collection, Derived calculations
  • Version 1.5: 2019-10-23
    Changes: Data collection, Other
  • Version 1.6: 2019-12-04
    Changes: Data collection