5NZW

Crystal structure of DNA cross-link repair protein 1A in complex with ceftriaxone


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.315 
  • R-Value Work: 0.226 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of DNA cross-link repair protein 1A in complex with ceftriaxone

Newman, J.A.Aitkenhead, H.Kupinska, K.Burgess-Brown, N.A.Talon, R.Krojer, T.von Delft, F.Arrowsmith, C.H.Edwards, A.Bountra, C.Gileadi, O.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
DNA cross-link repair 1A protein
A
343Homo sapiensGene Names: DCLRE1A (KIAA0086, SNM1, SNM1A)
Find proteins for Q6PJP8 (Homo sapiens)
Go to Gene View: DCLRE1A
Go to UniProtKB:  Q6PJP8
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
9F2
Query on 9F2

Download SDF File 
Download CCD File 
A
Ceftriaxone
C18 H18 N8 O7 S3
VAAUVRVFOQPIGI-TYHRLYECSA-N
 Ligand Interaction
NI
Query on NI

Download SDF File 
Download CCD File 
A
NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.315 
  • R-Value Work: 0.226 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 51.356α = 90.00
b = 58.495β = 90.00
c = 112.538γ = 90.00
Software Package:
Software NamePurpose
MOLREPphasing
XDSdata reduction
XDSdata scaling
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationCountryGrant Number
Wellcome TrustUnited Kingdom--

Revision History 

  • Version 1.0: 2017-06-14
    Type: Initial release
  • Version 1.1: 2017-08-23
    Type: Author supporting evidence, Refinement description