Substrate recognition by an amidase of the nitrilase superfamily
Kimani, S.W., Venter, G.A., Sewell, B.T.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Amidase | 283 | Nesterenkonia sp. 10004 | Mutation(s): 1  Gene Names: Nit2 EC: 3.5.1.4 | ||
UniProt | |||||
Find proteins for D0VWZ1 (Nesterenkonia sp. 10004) Explore D0VWZ1  Go to UniProtKB:  D0VWZ1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | D0VWZ1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NCA Query on NCA | C [auth A], D [auth A], E [auth A] | NICOTINAMIDE C6 H6 N2 O DFPAKSUCGFBDDF-UHFFFAOYSA-N | |||
CL Query on CL | B [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
CSD Query on CSD | A | L-PEPTIDE LINKING | C3 H7 N O4 S | CYS |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 75.249 | α = 90 |
b = 114.779 | β = 90 |
c = 65.363 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
SCALEPACK | data scaling |
PDB_EXTRACT | data extraction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Research Foundation | South Africa | 91532 |