5LWP

Discovery of phenoxyindazoles and phenylthioindazoles as RORg inverse agonists


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.200 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Discovery of phenoxyindazoles and phenylthioindazoles as ROR gamma inverse agonists.

Ouvry, G.Bouix-Peter, C.Ciesielski, F.Chantalat, L.Christin, O.Comino, C.Duvert, D.Feret, C.Harris, C.S.Lamy, L.Luzy, A.P.Musicki, B.Orfila, D.Pascau, J.Parnet, V.Perrin, A.Pierre, R.Polge, G.Raffin, C.Rival, Y.Taquet, N.Thoreau, E.Hennequin, L.F.

(2016) Bioorg.Med.Chem.Lett. 26: 5802-5808

  • DOI: 10.1016/j.bmcl.2016.10.023

  • PubMed Abstract: 
  • Targeting the IL17 pathway and more specifically the nuclear receptor RORγ is thought to be beneficial in multiple skin disorders. The Letter describes the discovery of phenoxyindazoles and thiophenoxy indazoles as potent RORγ inverse agonists. Optim ...

    Targeting the IL17 pathway and more specifically the nuclear receptor RORγ is thought to be beneficial in multiple skin disorders. The Letter describes the discovery of phenoxyindazoles and thiophenoxy indazoles as potent RORγ inverse agonists. Optimization of the potency and efforts to mitigate the phototoxic liability of the series are presented. Finally, crystallization of the lead compound revealed that the series bound to an allosteric site of the nuclear receptor. Such compounds could be useful as tool compounds for understanding the impact of topical treatment on skin disease models.


    Organizational Affiliation

    Galderma R&D, Les Templiers 2400 Route des Colles, 06410 Biot, France.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Nuclear receptor ROR-gamma
A
244Homo sapiensMutation(s): 0 
Gene Names: RORC (NR1F3, RORG, RZRG)
Find proteins for P51449 (Homo sapiens)
Go to Gene View: RORC
Go to UniProtKB:  P51449
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
79U
Query on 79U

Download SDF File 
Download CCD File 
A
4-[3-[2-chloranyl-6-(trifluoromethyl)phenoxy]-5-(dimethylcarbamoyl)indazol-1-yl]benzoic acid
C24 H17 Cl F3 N3 O4
PRFOAGMHUSKCKE-UHFFFAOYSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
79UIC50: 120 nM BINDINGMOAD
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.200 
  • Space Group: H 3 2
Unit Cell:
Length (Å)Angle (°)
a = 173.810α = 90.00
b = 173.810β = 90.00
c = 68.400γ = 120.00
Software Package:
Software NamePurpose
XSCALEdata scaling
XDSdata reduction
REFMACrefinement
PDB_EXTRACTdata extraction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2016-11-16
    Type: Initial release
  • Version 1.1: 2016-12-07
    Type: Database references