Crystal Structure of rRNA methyltransferase from Sinorhizobium meliloti
Dey, D., Hegde, R.P., Almo, S.C., Ramakumar, S., Ramagopal, U.A.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Probable RNA methyltransferase, TrmH family | 288 | Sinorhizobium meliloti 1021 | Mutation(s): 0  Gene Names: SMc01130 EC: 2.1.1 | ||
UniProt | |||||
Find proteins for Q92SJ4 (Rhizobium meliloti (strain 1021)) Explore Q92SJ4  Go to UniProtKB:  Q92SJ4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q92SJ4 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | D [auth A], F [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
CO Query on CO | C [auth A], E [auth B] | COBALT (II) ION Co XLJKHNWPARRRJB-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 65.82 | α = 90 |
b = 84.302 | β = 90 |
c = 112.045 | γ = 90 |
Software Name | Purpose |
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HKL-3000 | data processing |
SHELXDE | phasing |
REFMAC | refinement |