5JYO

Allosteric inhibition of Kidney Isoform of Glutaminase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.098 Å
  • R-Value Free: 0.213 
  • R-Value Work: 0.190 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Allosteric inhibition of KGA

Ramachandran, S.Sivaraman, J.

(2016) Oncotarget --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Glutaminase kidney isoform, mitochondrial
D, A, B, C, E, F, G, H
333Homo sapiensMutation(s): 0 
Gene Names: GLS (GLS1, KIAA0838)
EC: 3.5.1.2
Find proteins for O94925 (Homo sapiens)
Go to Gene View: GLS
Go to UniProtKB:  O94925
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
63J
Query on 63J

Download SDF File 
Download CCD File 
C, D, F
2-(pyridin-2-yl)-N-(5-{4-[6-({[3-(trifluoromethoxy)phenyl]acetyl}amino)pyridazin-3-yl]butyl}-1,3,4-thiadiazol-2-yl)acetamide
C26 H24 F3 N7 O3 S
PRAAPINBUWJLGA-UHFFFAOYSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
63JIC50: 5 - 180 nM (99) BINDINGDB
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.098 Å
  • R-Value Free: 0.213 
  • R-Value Work: 0.190 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 126.404α = 112.88
b = 126.629β = 102.81
c = 126.269γ = 112.74
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data scaling
HKL-2000data reduction
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Ministry of Education (MoE) SingaporeSingaporeTier-2 grant R154-000-625-112

Revision History 

  • Version 1.0: 2016-08-03
    Type: Initial release
  • Version 1.1: 2016-08-17
    Type: Derived calculations