Crystal structure of a plant enzyme

Experimental Data Snapshot

  • Resolution: 1.90 Å
  • R-Value Free: 0.206 
  • R-Value Work: 0.160 
  • R-Value Observed: 0.161 

wwPDB Validation   3D Report Full Report

Ligand Structure Quality Assessment 

This is version 1.1 of the entry. See complete history


Crystal Structures of Arabidopsis thaliana Oxalyl-CoA Synthetase Essential for Oxalate Degradation

Fan, M.Xiao, Y.Li, M.Chang, W.

(2016) Mol Plant 9: 1349-1352

  • DOI: https://doi.org/10.1016/j.molp.2016.06.002
  • Primary Citation of Related Structures:  
    5IE0, 5IE2, 5IE3

  • Organizational Affiliation

    National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, 15th Datun Road, Chaoyang District, Beijing 100101, People's Republic of China; University of Chinese Academy of Sciences, 19A Yuquan Road, Beijing, 100049, People's Republic of China.

Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Oxalate--CoA ligase
A, B
514Arabidopsis thalianaMutation(s): 0 
Gene Names: AAE34CLL10AMPBP3At3g48990T2J13.170
Find proteins for Q9SMT7 (Arabidopsis thaliana)
Explore Q9SMT7 
Go to UniProtKB:  Q9SMT7
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9SMT7
Sequence Annotations
  • Reference Sequence
Small Molecules
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 71.193α = 90
b = 117.043β = 93.59
c = 72.062γ = 90
Software Package:
Software NamePurpose
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

View Full Validation Report

Ligand Structure Quality Assessment 

Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2016-12-07
    Type: Initial release
  • Version 1.1: 2024-03-20
    Changes: Data collection, Database references