5GZ2

luciferase complex with 7-cy-L

• PDB DOI: https://doi.org/10.2210/pdb5GZ2/pdb

• Classification: OXIDOREDUCTASE
• Organism(s): Photinus pyralis
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2016-09-26 Released: 2017-09-27 
• Deposition Author(s): Su, J., Wang, F., Gu, L.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.00 Å
• R-Value Free: 0.239 
• R-Value Work: 0.208 
• R-Value Observed: 0.209 

Literature

luciferase complex with 7-cy-L

Su, J., Wang, F.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 48.89 kDa 
• Atom Count: 3,536 
• Modelled Residue Count: 432 
• Deposited Residue Count: 436 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Luciferin 4-monooxygenase	A	436	Photinus pyralis	Mutation(s): 0  EC: 1.13.12.7
UniProt
Find proteins for P08659 (Photinus pyralis) Explore P08659  Go to UniProtKB:  P08659

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
7BV	B [auth A]	(4S)-2-[6-(azepan-1-yl)-1,3-benzothiazol-2-yl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid C17 H19 N3 O2 S2 GRFYBXURSQOJAN-CYBMUJFWSA-N

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.00 Å
• R-Value Free: 0.239 
• R-Value Work: 0.208 
• R-Value Observed: 0.209 
• Space Group: P 4₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 74.154	α = 90
b = 74.154	β = 90
c = 95.622	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
HKL-2000	data reduction
HKL-2000	data scaling
PHENIX	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2017-09-27 
Deposition Author(s): Su, J., Wang, F., Gu, L.

Revision History  

• Version 1.0: 2017-09-27
  Type: Initial release
  
• Version 1.1: 2024-03-20
  Changes: Data collection, Database references