High resolution crystal structures of Colocasia esculenta agglutinin with and without mannose
Chattopadhyaya, R.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Tuber agglutinin | 109 | Colocasia esculenta | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for R9RL27 (Colocasia esculenta) Explore R9RL27  Go to UniProtKB:  R9RL27 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | R9RL27 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Tuber agglutinin | 112 | Colocasia esculenta | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for R9RL27 (Colocasia esculenta) Explore R9RL27  Go to UniProtKB:  R9RL27 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | R9RL27 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
BMA Query on BMA | C [auth A], D [auth A], E [auth B], F [auth B], G [auth B] | beta-D-mannopyranose C6 H12 O6 WQZGKKKJIJFFOK-RWOPYEJCSA-N | |||
PO4 Query on PO4 | H [auth B] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 75.896 | α = 90 |
b = 75.896 | β = 90 |
c = 124.065 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
d*TREK | data reduction |
d*TREK | data scaling |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
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DST, Government of India | India | Institutional |