Macromolecule Content

Total Structure Weight: 40.85 kDa
Atom Count: 3000
Modelled Residue Count: 336
Deposited Residue Count: 366
Unique protein chains: 1

5B6K

Crystal structure of Ketoreductase 1 from Candida glabrata

PDB DOI: 10.2210/pdb5B6K/pdb

Classification: OXIDOREDUCTASE
Organism(s): [Candida] glabrata CBS 138
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2016-05-30 Released: 2017-05-31
Deposition Author(s): Qin, B., Mori, T., Abe, I., You, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.70 Å
R-Value Free: 0.191
R-Value Work: 0.168
R-Value Observed: 0.169

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Engineering of Candida glabrata Ketoreductase 1 for Asymmetric Reduction of alpha-Halo Ketones

Qin, F., Qin, B., Mori, T., Wang, Y., Meng, L., Zhang, X., Jia, X., Abe, I., You, S.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Uncharacterized protein CgKR1	A	366	[Candida] glabrata CBS 138	Mutation(s): 0 Gene Names: GRE2(A), CAGL0E05170g
UniProt
Find proteins for Q6FV31 (Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)) Explore Q6FV31 Go to UniProtKB: Q6FV31
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q6FV31
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
SO4 Query on SO4 Download Ideal Coordinates CCD File SDF format, chain B [auth A] MOL2 format, chain B [auth A]	B [auth A]	SULFATE ION O₄ S QAOWNCQODCNURD-UHFFFAOYSA-L		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.70 Å
R-Value Free: 0.191
R-Value Work: 0.168
R-Value Observed: 0.169
Space Group: P 6₅

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 61.62	α = 90
b = 61.62	β = 90
c = 189.93	γ = 120

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
XDS	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2016-05-30
Released Date: 2017-05-31

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2017-05-31
Type: Initial release
Version 1.1: 2020-09-16
Changes: Structure summary

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.