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Download EndnoteMembrane association of monotopic phosphoglycosyl transferase underpins function.
Ray, L.C., Das, D., Entova, S., Lukose, V., Lynch, A.J., Imperiali, B., Allen, K.N.(2018) Nat. Chem. Biol. 14: 538-541
- PubMed: 29769739
5W7L
Structure of Campylobacter concisus PglC I57M/Q175M variant
- DOI: 10.2210/pdb5W7L/pdb
- Classification: MEMBRANE PROTEIN
- Organism(s): Campylobacter concisus (strain 13826)
- Expression System: Escherichia coli
- Mutation(s): 2
- Deposited: 2017-06-20 Released: 2018-05-23
- Funding Organization(s): National Science Foundation; NIGMS
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.74 Å
- R-Value Free: 0.281
- R-Value Work: 0.259
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| N,N'-diacetylbacilliosaminyl-1-phosphate transferase | A, B | 205 | Campylobacter concisus (strain 13826) | Mutation(s): 2 Gene Names: pglC EC: 2.7.8.36 |
Membrane proteinmpstruct | Group: MONOTOPIC MEMBRANE PROTEINS | Sub Group: Phosphoglycosyl Transferases (PGT) | Protein: PglC phosphoglycosyl transferase, I57M/Q175M variant | |
Find proteins for A7ZET4 (Campylobacter concisus (strain 13826)) Go to UniProtKB: A7ZET4 | ||||
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PO4 Query on PO4 | A | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | Ligand Interaction | |
| PEF Query on PEF | A, B | DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE 3-[AMINOETHYLPHOSPHORYL]-[1,2-DI-PALMITOYL]-SN-GLYCEROL C37 H74 N O8 P SLKDGVPOSSLUAI-PGUFJCEWSA-N |  | Ligand Interaction | |
| PG4 Query on PG4 | A | TETRAETHYLENE GLYCOL C8 H18 O5 UWHCKJMYHZGTIT-UHFFFAOYSA-N |  | Ligand Interaction | |
| MG Query on MG | A, B | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.74 Å
- R-Value Free: 0.281
- R-Value Work: 0.259
- Space Group: P 32 2 1
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 70.802 | α = 90.00 |
| b = 70.802 | β = 90.00 |
| c = 188.442 | γ = 120.00 |
| Software Name | Purpose |
|---|---|
| XDS | data reduction |
| Aimless | data scaling |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
| SHELXD | phasing |
| PHENIX | model building |
Entry History & Funding Information
Deposition Data
- Deposited Date: 2017-06-20
- Released Date: 2018-05-23
- Deposition Author(s): Ray, L.C., Das, D., Imperiali, B., Allen, K.N.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Science Foundation | United States | MCB1614608 |
| NIGMS | United States | GM-039334 |
Revision History
- Version 1.0: 2018-05-23
Type: Initial release - Version 1.1: 2018-05-30
Type: Data collection, Database references - Version 1.2: 2018-11-07
Type: Data collection, Database references
