4ZDH

Crystal structure of JKA6 TCR


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.224 
  • R-Value Work: 0.190 
  • R-Value Observed: 0.192 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Crystal structure of JKA6 TCR

Singh, N.K.Hossain, M.Baker, B.M.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Alpha chain of A6 T-cell receptor,T-cell receptor alpha chain C region A201Homo sapiensMutation(s): 0 
Gene Names: TRAV12-2TRACTCRA
Find proteins for A0A075B6T6 (Homo sapiens)
Explore A0A075B6T6 
Go to UniProtKB:  A0A075B6T6
NIH Common Fund Data Resources
PHAROS:  A0A075B6T6
Find proteins for P01848 (Homo sapiens)
Explore P01848 
Go to UniProtKB:  P01848
NIH Common Fund Data Resources
PHAROS:  P01848
Protein Feature View
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Beta chain of JKF6 T-cell receptor,Protein TRBV28 B241Homo sapiensMutation(s): 0 
Gene Names: TRBC1TRBV28
Find proteins for A0A5B6 (Homo sapiens)
Explore A0A5B6 
Go to UniProtKB:  A0A5B6
NIH Common Fund Data Resources
PHAROS:  A0A5B6
Find proteins for P01850 (Homo sapiens)
Explore P01850 
Go to UniProtKB:  P01850
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.224 
  • R-Value Work: 0.190 
  • R-Value Observed: 0.192 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 44.695α = 90
b = 60.087β = 91.75
c = 82.462γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data scaling
Cootmodel building
HKL-2000data reduction
PHASERphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2016-05-04
    Type: Initial release
  • Version 1.1: 2017-11-22
    Changes: Derived calculations, Refinement description