4YRH

p21 isoform of MEC-17 from Danio Rerio

  • Classification: TRANSFERASE
  • Organism(s): Danio rerio
  • Expression System: Escherichia coli
  • Mutation(s): No 

  • Deposited: 2015-03-15 Released: 2015-07-01 
  • Deposition Author(s): Xue, T.
  • Funding Organization(s): Tianjin Natural Science Foundation

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.86 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.218 
  • R-Value Observed: 0.221 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structure of DrMEC-17 residue 2-185 at 2.85 Angstroms resolution

Xue, T.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Alpha-tubulin N-acetyltransferase 1 AB184Danio rerioMutation(s): 0 
Gene Names: atat1mec17si:ch211-152p11.5zgc:65893
EC: 2.3.1.108
Find proteins for Q6PH17 (Danio rerio)
Explore Q6PH17 
Go to UniProtKB:  Q6PH17
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ACO
Query on ACO

Download Ideal Coordinates CCD File 
A, B
ACETYL COENZYME *A
C23 H38 N7 O17 P3 S
ZSLZBFCDCINBPY-ZSJPKINUSA-N
 Ligand Interaction
EPE
Query on EPE

Download Ideal Coordinates CCD File 
A, B
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
C8 H18 N2 O4 S
JKMHFZQWWAIEOD-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A,BL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.86 Å
  • R-Value Free: 0.256 
  • R-Value Work: 0.218 
  • R-Value Observed: 0.221 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 74.374α = 90
b = 66.299β = 103.84
c = 75.841γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data processing
HKL-2000data scaling
Cootmodel building

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2015-03-15 
  • Released Date: 2015-07-01 
  • Deposition Author(s): Xue, T.

Funding OrganizationLocationGrant Number
Tianjin Natural Science FoundationChinagrant 14JCQNJC09300

Revision History  (Full details and data files)

  • Version 1.0: 2015-07-01
    Type: Initial release