4YF5

Crystal structure of Rv1284 in the presence of polycarpine at acidic pH


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.260 
  • R-Value Work: 0.197 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Chemical probing suggests redox-regulation of the carbonic anhydrase activity of mycobacterial Rv1284.

Nienaber, L.Cave-Freeman, E.Cross, M.Mason, L.Bailey, U.M.Amani, P.A Davis, R.Taylor, P.Hofmann, A.

(2015) Febs J. 282: 2708-2721


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Beta-carbonic anhydrase 1
A, B, C, D
172Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)Mutation(s): 0 
Gene Names: mtcA1 (canA)
EC: 4.2.1.1
Find proteins for P9WPJ6 (Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh))
Go to UniProtKB:  P9WPJ6
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A, C
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
CL
Query on CL

Download SDF File 
Download CCD File 
A, C
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.260 
  • R-Value Work: 0.197 
  • Space Group: F 2 2 2
Unit Cell:
Length (Å)Angle (°)
a = 103.289α = 90.00
b = 153.932β = 90.00
c = 159.098γ = 90.00
Software Package:
Software NamePurpose
SCALAdata scaling
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2015-02-25 
  • Released Date: 2015-05-06 
  • Deposition Author(s): Hofmann, A.

Revision History 

  • Version 1.0: 2015-05-06
    Type: Initial release
  • Version 1.1: 2015-05-13
    Type: Database references
  • Version 1.2: 2015-07-22
    Type: Database references
  • Version 1.3: 2017-11-22
    Type: Data collection, Derived calculations, Refinement description, Source and taxonomy