Crystal Structures of CdNal from Clostridium difficile in complex with ketobutyric
Liu, W.D., Guo, R.T., Cui, Y.F., Chen, X., Wu, Q.Q., Zhu, D.M.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
N-acetylneuraminate lyase | 302 | Clostridioides difficile NAP08 | Mutation(s): 0  Gene Names: CdNal EC: 4.1.3.3 | ||
UniProt | |||||
Find proteins for D5Q364 (Clostridioides difficile NAP08) Explore D5Q364  Go to UniProtKB:  D5Q364 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | D5Q364 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
2KT Query on 2KT | I [auth A] J [auth B] K [auth C] L [auth D] M [auth E] | 2-KETOBUTYRIC ACID C4 H6 O3 TYEYBOSBBBHJIV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 81.875 | α = 90 |
b = 122.612 | β = 95.72 |
c = 122.186 | γ = 90 |
Software Name | Purpose |
---|---|
HKL-2000 | data reduction |
MOLREP | phasing |
CNS | refinement |
PDB_EXTRACT | data extraction |
Funding Organization | Location | Grant Number |
---|---|---|
National Natural Science Foundation of China | China | 21072151 |
National Natural Science Foundation of China | China | 21102100 |
National Basic Research Program of China | China | 2011CB710801 |