4WO3

THE SECOND C-KIT DNA QUADRUPLEX CRYSTAL STRUCTURE

  • Classification: DNA
  • Organism(s): Homo sapiens

  • Deposited: 2014-10-15 Released: 2014-10-29 
  • Deposition Author(s): Wei, D., Neidle, S.
  • Funding Organization(s): Cancer Research UK 

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.73 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.182 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

THE SECOND C-KIT1 DNA QUADRUPLEX CRYSTAL STRUCTURE

Wei, D.Neidle, S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsLengthOrganism
DNA (5'-D(*AP*GP*GP*GP*AP*GP*GP*GP*CP*GP*CP*TP*GP*GP*GP*AP*GP*GP*AP*GP*GP*G)-3')B,A22Homo sapiens
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
K
Query on K

Download SDF File 
Download CCD File 
A, B
POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.73 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.182 
  • Space Group: H 3
Unit Cell:
Length (Å)Angle (°)
a = 94.850α = 90.00
b = 94.850β = 90.00
c = 30.363γ = 120.00
Software Package:
Software NamePurpose
PHASESphasing
REFMACrefinement
SCALAdata scaling
XIAdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2014-10-15 
  • Released Date: 2014-10-29 
  • Deposition Author(s): Wei, D., Neidle, S.

Funding OrganizationLocationGrant Number
Cancer Research UKUnited KingdomC129/A4489
Cancer Research UKUnited Kingdoma China Fellowship

Revision History 

  • Version 1.0: 2014-10-29
    Type: Initial release
  • Version 1.1: 2014-11-26
    Type: Derived calculations, Non-polymer description, Other, Refinement description, Structure summary
  • Version 1.2: 2019-06-12
    Type: Data collection, Database references