4WNY | pdb_00004wny

Crystal structure of a protein from the universal stress protein family from Burkholderia pseudomallei

PDB DOI: https://doi.org/10.2210/pdb4WNY/pdb

Classification: SIGNALING PROTEIN
Organism(s): Burkholderia pseudomallei 1710b
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2014-10-14 Released: 2014-11-05
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.25 Å
R-Value Free:
0.227 (Depositor), 0.228 (DCC)
R-Value Work:
0.224 (Depositor), 0.227 (DCC)
R-Value Observed:
0.224 (Depositor)

Starting Model: experimental
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This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of a protein from the universal stress protein family from Burkholderia pseudomallei

Seattle Structural Genomics Center for Infectious Disease (SSGCID), Abendroth, J., Dranow, D.M., Lorimer, D.D., Edwards, T.E.

To be published.

Macromolecule Content

Total Structure Weight: 17.92 kDa
Atom Count: 975
Modeled Residue Count: 132
Deposited Residue Count: 168
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Universal stress protein	A	168	Burkholderia pseudomallei 1710b	Mutation(s): 0 Gene Names: BURPS1710b_A2430
UniProt
Find proteins for Q3JFS3 (Burkholderia pseudomallei (strain 1710b)) Explore Q3JFS3 Go to UniProtKB: Q3JFS3
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q3JFS3
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.25 Å
R-Value Free: 0.227 (Depositor), 0.228 (DCC)
R-Value Work: 0.224 (Depositor), 0.227 (DCC)
R-Value Observed: 0.224 (Depositor)

Diffraction Data:

Space Group: P 3₁ 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 79.26	α = 90
b = 79.26	β = 90
c = 39.64	γ = 120

Software Package:

Software Name	Purpose
XDS	data reduction
MOLREP	phasing
ARP	model building
PHENIX	refinement
PDB_EXTRACT	data extraction

Structure Validation

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Entry History

Deposition Data

Released Date: 2014-11-05

Deposition Author(s):

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History (Full details and data files)

Version 1.0: 2014-11-05
Type: Initial release
Version 1.1: 2023-09-27
Changes: Data collection, Database references, Derived calculations, Other, Refinement description, Source and taxonomy, Structure summary