Biological Assembly 1  

 3D View: Structure | 1D-3D View | Electron Density | Validation Report

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 43.11 kDa 
• Atom Count: 3669 
• Modelled Residue Count: 368 
• Deposited Residue Count: 372 
• Unique protein chains: 2

4WIH

Crystal structure of cAMP-dependent Protein Kinase A from Cricetulus griseus

• PDB DOI: 10.2210/pdb4WIH/pdb

• Classification: TRANSFERASE
• Organism(s): Cricetulus griseus, synthetic construct
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2014-09-25 Released: 2014-10-22 
• Deposition Author(s): Kudlinzki, D., Linhard, V.L., Saxena, K., Dreyer, M., Schwalbe, H.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.14 Å
• R-Value Free: 0.191 
• R-Value Work: 0.177 
• R-Value Observed: 0.178 

Literature

High-resolution crystal structure of cAMP-dependent protein kinase from Cricetulus griseus.

Kudlinzki, D., Linhard, V.L., Saxena, K., Sreeramulu, S., Gande, S., Schieborr, U., Dreyer, M., Schwalbe, H.

(2015) Acta Crystallogr F Struct Biol Commun 71: 1088-1093

• PubMed: 26249705 
• DOI: 10.1107/S2053230X1501242X
• Primary Citation of Related Structures:  
  4WIH


• PubMed Abstract: 
  

Protein kinases (PKs) are dynamic regulators of numerous cellular processes. Their phosphorylation activity is determined by the conserved kinase core structure, which is maintained by the interaction and dynamics with associated domains or interacting proteins. The prototype enzyme for investigations to understand the activity and regulation of PKs is the catalytic subunit of cAMP-dependent protein kinase (PKAc). Major effects of functional regulation and ligand binding are driven by only minor structural modulations in protein-protein interactions. In order to resolve such minor structural differences, very high resolution structures are required. Here, the high-resolution X-ray structure of PKAc from Cricetulus griseus is reported.

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Organizational Affiliation: 

Institute for Organic Chemistry and Chemical Biology, Center for Biomolecular Magnetic Resonance, Johann Wolfgang Goethe University Frankfurt, Max von Laue Strasse 7, 60438 Frankfurt, Germany.

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
cAMP-dependent protein kinase catalytic subunit alpha	A	353	Cricetulus griseus	Mutation(s): 0  Gene Names: PRKACA EC: 2.7.11.11
UniProt
Find proteins for P25321 (Cricetulus griseus) Explore P25321  Go to UniProtKB:  P25321

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
cAMP Dependent Protein Kinase Inhibitor PKI-tide	B	19	synthetic construct	Mutation(s): 0
UniProt
Find proteins for G3HK48 (Cricetulus griseus) Explore G3HK48  Go to UniProtKB:  G3HK48

Small Molecules

Modified Residues  2 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
SEP	A	L-PEPTIDE LINKING	C3 H8 N O6 P		SER
TPO	A	L-PEPTIDE LINKING	C4 H10 N O6 P		THR

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.14 Å
• R-Value Free: 0.191 
• R-Value Work: 0.177 
• R-Value Observed: 0.178 
• Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 58.276	α = 90
b = 72.949	β = 90
c = 109.351	γ = 90

Software Package:

Software Name	Purpose
XDS	data reduction
Aimless	data scaling
PHASER	phasing
PHENIX	refinement
Coot	model building

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2014-09-25 
• Released Date: 2014-10-22 
Deposition Author(s): Kudlinzki, D., Linhard, V.L., Saxena, K., Dreyer, M., Schwalbe, H.

Revision History  

• Version 1.0: 2014-10-22
  Type: Initial release
  
• Version 1.1: 2015-08-05
  Changes: Database references
• Version 1.2: 2015-08-12
  Changes: Database references
• Version 1.3: 2015-08-19
  Changes: Database references