Download MendeleySTRUCTURE OF ZINGIBER OFFICINALE DOUBLE BOND REDUCTASE
Buratto, J., Langlois d'Estaintot, B., Granier, T., Gallois, B., Willis, M.A., Sang, Y., Flores-Sanchez, I.J., Gang, D.R.To be published.
4WGG
STRUCTURE OF THE TERNARY COMPLEX OF A ZINGIBER OFFICINALE DOUBLE BOND REDUCTASE IN COMPLEX WITH NADP AND CONIFERYL ALDEHYDE
- PDB DOI: https://doi.org/10.2210/pdb4WGG/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Zingiber officinale
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2014-09-18 Released: 2015-09-30
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.279
- R-Value Work: 0.190
- R-Value Observed: 0.194
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Double Bond Reductase | 352 | Zingiber officinale | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for A0A096LNF0 (Zingiber officinale) Explore A0A096LNF0 Go to UniProtKB: A0A096LNF0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A096LNF0 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAP Query on NAP | C [auth A], E [auth B] | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE C21 H28 N7 O17 P3 XJLXINKUBYWONI-NNYOXOHSSA-N |  | ||
| CIY Query on CIY | D [auth A] | (2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enal C10 H10 O3 DKZBBWMURDFHNE-NSCUHMNNSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.279
- R-Value Work: 0.190
- R-Value Observed: 0.194
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 60.748 | α = 90 |
| b = 77.889 | β = 90 |
| c = 155.882 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| MOLREP | phasing |
Entry History
Deposition Data
- Released Date: 2015-09-30 Deposition Author(s): Collery, J., Langlois d'Estaintot, B., Buratto, J., Granier, T., Gallois, B., Willis, M.A., Sang, Y., Flores-Sanchez, I.J., Gang, D.R.
Revision History (Full details and data files)
- Version 1.0: 2015-09-30
Type: Initial release - Version 1.1: 2019-06-12
Changes: Data collection, Database references, Structure summary - Version 1.2: 2024-01-10
Changes: Data collection, Database references, Refinement description
