4W7U

Crystal structure of XacCel5A in the native form

• PDB DOI: https://doi.org/10.2210/pdb4W7U/pdb

• Classification: HYDROLASE
• Organism(s): Xanthomonas citri pv. citri str. 306
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2014-08-22 Released: 2015-10-21 
• Deposition Author(s): Paiva, J.H., Murakami, M.T.
• Funding Organization(s): Sao Paulo Research Foundation (FAPESP)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.48 Å
• R-Value Free: 0.193 
• R-Value Work: 0.144 
• R-Value Observed: 0.146 

Literature

Crystal structure of XacCel5A in the native form

Paiva, J.H., Murakami, M.T.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 36.96 kDa 
• Atom Count: 2,680 
• Modelled Residue Count: 313 
• Deposited Residue Count: 332 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Cellulase	A	332	Xanthomonas citri pv. citri str. 306	Mutation(s): 0  Gene Names: egl, XAC0030

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
CAC	B [auth A], C [auth A]	CACODYLATE ION C2 H6 As O2 OGGXGZAMXPVRFZ-UHFFFAOYSA-M

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.48 Å
• R-Value Free: 0.193 
• R-Value Work: 0.144 
• R-Value Observed: 0.146 
• Space Group: P 2₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 79.367	α = 90
b = 81.73	β = 90
c = 48.232	γ = 90

Software Package:

Software Name	Purpose
XDS	data scaling
REFMAC	refinement
PDB_EXTRACT	data extraction
XSCALE	data scaling

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2015-10-21 
Deposition Author(s): Paiva, J.H., Murakami, M.T.

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Funding Organization	Location	Grant Number
Sao Paulo Research Foundation (FAPESP)	Brazil	2013/13309-0 and 2014/07135-1

Revision History  

• Version 1.0: 2015-10-21
  Type: Initial release
  
• Version 1.1: 2017-11-22
  Changes: Derived calculations, Refinement description
• Version 1.2: 2019-02-13
  Changes: Data collection, Source and taxonomy
• Version 1.3: 2019-04-17
  Changes: Author supporting evidence, Data collection
• Version 1.4: 2020-01-01
  Changes: Author supporting evidence
• Version 1.5: 2023-09-27
  Changes: Data collection, Database references, Refinement description