4V6W

Structure of the D. melanogaster 80S ribosome


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 6 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Structures of the human and Drosophila 80S ribosome.

Anger, A.M.Armache, J.P.Berninghausen, O.Habeck, M.Subklewe, M.Wilson, D.N.Beckmann, R.

(2013) Nature 497: 80-85

  • DOI: 10.1038/nature12104
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • Protein synthesis in all cells is carried out by macromolecular machines called ribosomes. Although the structures of prokaryotic, yeast and protist ribosomes have been determined, the more complex molecular architecture of metazoan 80S ribosomes has ...

    Protein synthesis in all cells is carried out by macromolecular machines called ribosomes. Although the structures of prokaryotic, yeast and protist ribosomes have been determined, the more complex molecular architecture of metazoan 80S ribosomes has so far remained elusive. Here we present structures of Drosophila melanogaster and Homo sapiens 80S ribosomes in complex with the translation factor eEF2, E-site transfer RNA and Stm1-like proteins, based on high-resolution cryo-electron-microscopy density maps. These structures not only illustrate the co-evolution of metazoan-specific ribosomal RNA with ribosomal proteins but also reveal the presence of two additional structural layers in metazoan ribosomes, a well-ordered inner layer covered by a flexible RNA outer layer. The human and Drosophila ribosome structures will provide the basis for more detailed structural, biochemical and genetic experiments.


    Organizational Affiliation

    Gene Center, Department of Biochemistry and Center for integrated Protein Science Munich, Ludwig-Maximilians-Universit√§t M√ľnchen, Feodor-Lynen-Strasse 25, 81377 Munich, Germany.




Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Elongation factor 2
Az
844Drosophila melanogasterMutation(s): 0 
Gene Names: EF2 (Ef2b)
Find proteins for P13060 (Drosophila melanogaster)
Go to UniProtKB:  P13060
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Guanine nucleotide-binding protein subunit beta-like protein
Ag
318Drosophila melanogasterMutation(s): 0 
Gene Names: Rack1
Find proteins for O18640 (Drosophila melanogaster)
Go to UniProtKB:  O18640
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S20
AU
120Drosophila melanogasterMutation(s): 0 
Gene Names: RpS20
Find proteins for P55828 (Drosophila melanogaster)
Go to UniProtKB:  P55828
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S10a
AK
163Drosophila melanogasterMutation(s): 0 
Gene Names: RpS10a (RpS10)
Find proteins for Q9VB14 (Drosophila melanogaster)
Go to UniProtKB:  Q9VB14
Entity ID: 5
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S14
AO
151Drosophila melanogasterMutation(s): 0 
Gene Names: RpS14a
Find proteins for C0HKA0 (Drosophila melanogaster)
Go to UniProtKB:  C0HKA0
Entity ID: 6
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S23
AX
143Drosophila melanogasterMutation(s): 0 
Gene Names: RpS23
Find proteins for Q8T3U2 (Drosophila melanogaster)
Go to UniProtKB:  Q8T3U2
Entity ID: 7
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S12
AM
139Drosophila melanogasterMutation(s): 0 
Gene Names: RpS12 (RpS12E)
Find proteins for P80455 (Drosophila melanogaster)
Go to UniProtKB:  P80455
Entity ID: 8
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S18
AS
152Drosophila melanogasterMutation(s): 0 
Gene Names: RpS18
Find proteins for P41094 (Drosophila melanogaster)
Go to UniProtKB:  P41094
Entity ID: 9
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S29
Ad
56Drosophila melanogasterMutation(s): 0 
Gene Names: RpS29
Find proteins for Q9VH69 (Drosophila melanogaster)
Go to UniProtKB:  Q9VH69
Entity ID: 10
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S13
AN
151Drosophila melanogasterMutation(s): 0 
Gene Names: RpS13 (M(2)32A, Rp17)
Find proteins for Q03334 (Drosophila melanogaster)
Go to UniProtKB:  Q03334
Entity ID: 11
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S11
AL
155Drosophila melanogasterMutation(s): 0 
Gene Names: RpS11
Find proteins for Q0E9B6 (Drosophila melanogaster)
Go to UniProtKB:  Q0E9B6
Entity ID: 12
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S17
AR
131Drosophila melanogasterMutation(s): 0 
Gene Names: RpS17 (M(3)67C)
Find proteins for P17704 (Drosophila melanogaster)
Go to UniProtKB:  P17704
Entity ID: 13
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S15, isoform A
AP
148Drosophila melanogasterMutation(s): 0 
Gene Names: RpS15
Find proteins for Q7JZW2 (Drosophila melanogaster)
Go to UniProtKB:  Q7JZW2
Entity ID: 14
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S19a
AT
156Drosophila melanogasterMutation(s): 0 
Gene Names: RpS19a (RpS19)
Find proteins for P39018 (Drosophila melanogaster)
Go to UniProtKB:  P39018
Entity ID: 15
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S3a
AB
268Drosophila melanogasterMutation(s): 0 
Gene Names: RpS3A (C3, M(4)101)
Find proteins for P55830 (Drosophila melanogaster)
Go to UniProtKB:  P55830
Entity ID: 16
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein SA
AA
313Drosophila melanogasterMutation(s): 0 
Gene Names: sta
Find proteins for P38979 (Drosophila melanogaster)
Go to UniProtKB:  P38979
Entity ID: 17
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S21
AV
83Drosophila melanogasterMutation(s): 0 
Gene Names: RpS21 (oho23B)
Find proteins for O76927 (Drosophila melanogaster)
Go to UniProtKB:  O76927
Entity ID: 18
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S24
AY
131Drosophila melanogasterMutation(s): 0 
Gene Names: RpS24
Find proteins for Q9W229 (Drosophila melanogaster)
Go to UniProtKB:  Q9W229
Entity ID: 19
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S25
AZ
117Drosophila melanogasterMutation(s): 0 
Gene Names: RpS25 (RpS31)
Find proteins for P48588 (Drosophila melanogaster)
Go to UniProtKB:  P48588
Entity ID: 20
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S26
Aa
114Drosophila melanogasterMutation(s): 0 
Gene Names: RpS26
Find proteins for P13008 (Drosophila melanogaster)
Go to UniProtKB:  P13008
Entity ID: 21
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S27
Ab
84Drosophila melanogasterMutation(s): 0 
Gene Names: RpS27 (anon-EST:Posey295, Dmel\CG10423, Q9VBU9_DROME, Rp S27)
Find proteins for Q9VBU9 (Drosophila melanogaster)
Go to UniProtKB:  Q9VBU9
Entity ID: 22
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S28
Ac
65Drosophila melanogasterMutation(s): 0 
Gene Names: RpS28b
Find proteins for Q9W334 (Drosophila melanogaster)
Go to UniProtKB:  Q9W334
Entity ID: 23
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S3
AD
246Drosophila melanogasterMutation(s): 0 
Gene Names: RpS3 (M(3)95A)
Find proteins for Q06559 (Drosophila melanogaster)
Go to UniProtKB:  Q06559
Entity ID: 24
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S30, isoform A
Ae
132Drosophila melanogasterMutation(s): 0 
Gene Names: RpS30 (anon-EST:Posey127, Dmel\CG15697, Q9VDH8_DROME, Rps30, RpS30a, S30)
Find proteins for Q9VDH8 (Drosophila melanogaster)
Go to UniProtKB:  Q9VDH8
Entity ID: 25
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S27a
Af
80Drosophila melanogasterMutation(s): 0 
Gene Names: RpS27A (UB3-D, UBI-F80, Ubi-m)
Find proteins for P15357 (Drosophila melanogaster)
Go to UniProtKB:  P15357
Entity ID: 26
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S9
AJ
195Drosophila melanogasterMutation(s): 0 
Gene Names: RpS9
Find proteins for P55935 (Drosophila melanogaster)
Go to UniProtKB:  P55935
Entity ID: 27
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S4
AE
261Drosophila melanogasterMutation(s): 0 
Gene Names: RpS4 (RP4)
Find proteins for P41042 (Drosophila melanogaster)
Go to UniProtKB:  P41042
Entity ID: 28
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S2
AC
267Drosophila melanogasterMutation(s): 0 
Gene Names: RpS2 (sop)
Find proteins for P31009 (Drosophila melanogaster)
Go to UniProtKB:  P31009
Entity ID: 29
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S6
AG
248Drosophila melanogasterMutation(s): 0 
Gene Names: RpS6 (hen, l(1)air8)
Find proteins for P29327 (Drosophila melanogaster)
Go to UniProtKB:  P29327
Entity ID: 30
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S5a
AF
228Drosophila melanogasterMutation(s): 0 
Gene Names: RpS5a (M(1)15D, RpS5)
Find proteins for Q24186 (Drosophila melanogaster)
Go to UniProtKB:  Q24186
Entity ID: 31
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S7
AH
194Drosophila melanogasterMutation(s): 0 
Gene Names: RpS7
Find proteins for Q9VA91 (Drosophila melanogaster)
Go to UniProtKB:  Q9VA91
Entity ID: 32
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S15Aa
AW
130Drosophila melanogasterMutation(s): 0 
Gene Names: RpS15Aa (RpS15A)
Find proteins for P48149 (Drosophila melanogaster)
Go to UniProtKB:  P48149
Entity ID: 33
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S8
AI
208Drosophila melanogasterMutation(s): 0 
Gene Names: RpS8
Find proteins for Q8MLY8 (Drosophila melanogaster)
Go to UniProtKB:  Q8MLY8
Entity ID: 34
MoleculeChainsSequence LengthOrganismDetails
40S ribosomal protein S16
AQ
148Drosophila melanogasterMutation(s): 0 
Gene Names: RpS16
Find proteins for Q9W237 (Drosophila melanogaster)
Go to UniProtKB:  Q9W237
Entity ID: 35
MoleculeChainsSequence LengthOrganismDetails
Vig2, isoform B
Ah
121Drosophila melanogasterMutation(s): 0 
Gene Names: vig2 (anon-WO0118547.290, BcDNA:SD06613, CG11844, Dmel\CG11844, vig-2)
Find proteins for Q9VBX3 (Drosophila melanogaster)
Go to UniProtKB:  Q9VBX3
Entity ID: 38
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L10a-2
Cz
218Drosophila melanogasterMutation(s): 0 
Gene Names: RpL10Ab
Find proteins for Q9VTP4 (Drosophila melanogaster)
Go to UniProtKB:  Q9VTP4
Entity ID: 39
MoleculeChainsSequence LengthOrganismDetails
60S acidic ribosomal protein P0
Cq
223N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Entity ID: 40
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L12
CK
165Drosophila melanogasterMutation(s): 0 
Gene Names: RpL12
Find proteins for Q9W1B9 (Drosophila melanogaster)
Go to UniProtKB:  Q9W1B9
Entity ID: 41
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L13a
CO
205Drosophila melanogasterMutation(s): 0 
Gene Names: RpL13A
Find proteins for Q9VNE9 (Drosophila melanogaster)
Go to UniProtKB:  Q9VNE9
Entity ID: 42
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L13
CL
218Drosophila melanogasterMutation(s): 0 
Gene Names: RpL13 (bbc1)
Find proteins for P41126 (Drosophila melanogaster)
Go to UniProtKB:  P41126
Entity ID: 43
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L23
CV
140Drosophila melanogasterMutation(s): 0 
Gene Names: RpL23 (RpL17A)
Find proteins for P48159 (Drosophila melanogaster)
Go to UniProtKB:  P48159
Entity ID: 44
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L14
CM
166Drosophila melanogasterMutation(s): 0 
Gene Names: RpL14
Find proteins for P55841 (Drosophila melanogaster)
Go to UniProtKB:  P55841
Entity ID: 45
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L27a
Ca
149Drosophila melanogasterMutation(s): 0 
Gene Names: RpL27A (RpL27a2, RpL27Aa, RpL27Ab)
Find proteins for P41092 (Drosophila melanogaster)
Go to UniProtKB:  P41092
Entity ID: 46
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L15
CN
204Drosophila melanogasterMutation(s): 0 
Gene Names: RpL15 (ZITI)
Find proteins for O17445 (Drosophila melanogaster)
Go to UniProtKB:  O17445
Entity ID: 47
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L10
CI
218Drosophila melanogasterMutation(s): 0 
Gene Names: RpL10 (Qm)
Find proteins for O61231 (Drosophila melanogaster)
Go to UniProtKB:  O61231
Entity ID: 48
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L5
CD
299Drosophila melanogasterMutation(s): 0 
Gene Names: RpL5 (yip6)
Find proteins for Q9W5R8 (Drosophila melanogaster)
Go to UniProtKB:  Q9W5R8
Entity ID: 49
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L18
CQ
188Drosophila melanogasterMutation(s): 0 
Gene Names: RpL18
Find proteins for Q9VS34 (Drosophila melanogaster)
Go to UniProtKB:  Q9VS34
Entity ID: 50
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L19
CR
203Drosophila melanogasterMutation(s): 0 
Gene Names: RpL19 (M(2)60E)
Find proteins for P36241 (Drosophila melanogaster)
Go to UniProtKB:  P36241
Entity ID: 51
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L8
CA
256Drosophila melanogasterMutation(s): 0 
Gene Names: RpL8
Find proteins for Q9V3G1 (Drosophila melanogaster)
Go to UniProtKB:  Q9V3G1
Entity ID: 52
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L18a
CS
177Drosophila melanogasterMutation(s): 0 
Gene Names: RpL18A
Find proteins for P41093 (Drosophila melanogaster)
Go to UniProtKB:  P41093
Entity ID: 53
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L21
CT
159Drosophila melanogasterMutation(s): 0 
Gene Names: RpL21 (anon-EST:Posey18, anon-EST:Posey30, BcDNA:RH06526, Dmel\CG12775, Rp L21, RPL21)
Find proteins for Q9V9M7 (Drosophila melanogaster)
Go to UniProtKB:  Q9V9M7
Entity ID: 54
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L17
CP
186Drosophila melanogasterMutation(s): 0 
Gene Names: RpL17
Find proteins for Q9W3W8 (Drosophila melanogaster)
Go to UniProtKB:  Q9W3W8
Entity ID: 55
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L22
CU
299Drosophila melanogasterMutation(s): 0 
Gene Names: RpL22
Find proteins for P50887 (Drosophila melanogaster)
Go to UniProtKB:  P50887
Entity ID: 56
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L23A
CX
277Drosophila melanogasterMutation(s): 0 
Gene Names: RpL23A (153215_at, anon-EST:fe2D1, anon-EST:Liang-1.4, clone 1.4, Dmel\CG7977, L23A, L23a, PBP-3, Rp L23A, RPL23a, RpL23a, rpl23a, RpL25, rpL25)
Find proteins for Q9W0A8 (Drosophila melanogaster)
Go to UniProtKB:  Q9W0A8
Entity ID: 57
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L26
CY
149Drosophila melanogasterMutation(s): 0 
Gene Names: RpL26 (Dmel\CG6846, L26, lincRNA.S5499, Rp L26, RPL26)
Find proteins for Q9VVU2 (Drosophila melanogaster)
Go to UniProtKB:  Q9VVU2
Entity ID: 58
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L24
CW
155Drosophila melanogasterMutation(s): 0 
Gene Names: RpL24
Find proteins for Q9VJY6 (Drosophila melanogaster)
Go to UniProtKB:  Q9VJY6
Entity ID: 59
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L27
CZ
135Drosophila melanogasterMutation(s): 0 
Gene Names: RpL27 (chr3R:21510055..21510241, Dmel\CG4759, RPL27, RpL27e)
Find proteins for Q9VBN5 (Drosophila melanogaster)
Go to UniProtKB:  Q9VBN5
Entity ID: 60
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L28
Cr
144Drosophila melanogasterMutation(s): 0 
Gene Names: RpL28
Find proteins for Q9VZS5 (Drosophila melanogaster)
Go to UniProtKB:  Q9VZS5
Entity ID: 61
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L35
Ch
123Drosophila melanogasterMutation(s): 0 
Gene Names: RpL35 (anon-EST:fe1C12, anon-EST:Posey157, BcDNA:RE09547, Dmel\CG4111, Rp L35, RpL35-RB, RpL35e)
Find proteins for Q9W499 (Drosophila melanogaster)
Go to UniProtKB:  Q9W499
Entity ID: 62
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L29
Cb
76Drosophila melanogasterMutation(s): 0 
Gene Names: RpL29 (RpL43)
Find proteins for Q24154 (Drosophila melanogaster)
Go to UniProtKB:  Q24154
Entity ID: 63
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L3
CB
416Drosophila melanogasterMutation(s): 0 
Gene Names: RpL3
Find proteins for O16797 (Drosophila melanogaster)
Go to UniProtKB:  O16797
Entity ID: 64
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L7
CF
252Drosophila melanogasterMutation(s): 0 
Gene Names: RpL7
Find proteins for P32100 (Drosophila melanogaster)
Go to UniProtKB:  P32100
Entity ID: 65
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L30
Cc
111Drosophila melanogasterMutation(s): 0 
Gene Names: RpL30 (anon-EST:fe1D4, BcDNA:RE25263, BcDNA:RH09938, Dmel\CG10652, l(2)01265, l(2)k09918, l(2)SH0229, l(2)SH2 0229, L30, plume, Rp L30, RPL30, Rpl30)
Find proteins for Q9VJ19 (Drosophila melanogaster)
Go to UniProtKB:  Q9VJ19
Entity ID: 66
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L31
Cd
124Drosophila melanogasterMutation(s): 0 
Gene Names: RpL31
Find proteins for Q9V597 (Drosophila melanogaster)
Go to UniProtKB:  Q9V597
Entity ID: 67
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L32
Ce
134Drosophila melanogasterMutation(s): 0 
Gene Names: RpL32 (M(3)99D, rp49)
Find proteins for P04359 (Drosophila melanogaster)
Go to UniProtKB:  P04359
Entity ID: 68
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L35A
Cf
157Drosophila melanogasterMutation(s): 0 
Gene Names: RpL35A (anon-EST:Posey39, Dmel\CG2099, L35a, Rp L35A, Rpl35A)
Find proteins for Q9VNB9 (Drosophila melanogaster)
Go to UniProtKB:  Q9VNB9
Entity ID: 69
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L34a
Cg
162Drosophila melanogasterMutation(s): 0 
Gene Names: RpL34a (CG6090-RA, Dmel\CG6090, L34, RpL34)
Find proteins for Q9VBH8 (Drosophila melanogaster)
Go to UniProtKB:  Q9VBH8
Entity ID: 70
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L36
Ci
115Drosophila melanogasterMutation(s): 0 
Gene Names: RpL36 (M(1)1B)
Find proteins for P49630 (Drosophila melanogaster)
Go to UniProtKB:  P49630
Entity ID: 71
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L37-A
Cj
93Drosophila melanogasterMutation(s): 0 
Gene Names: RpL37a
Find proteins for Q9VXX8 (Drosophila melanogaster)
Go to UniProtKB:  Q9VXX8
Entity ID: 72
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L38
Ck
70Drosophila melanogasterMutation(s): 0 
Gene Names: RpL38
Find proteins for Q9W5N2 (Drosophila melanogaster)
Go to UniProtKB:  Q9W5N2
Entity ID: 73
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L39
Cl
51Drosophila melanogasterMutation(s): 0 
Gene Names: RpL39 (rp46, RpL46)
Find proteins for O16130 (Drosophila melanogaster)
Go to UniProtKB:  O16130
Entity ID: 74
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L4
CC
401Drosophila melanogasterMutation(s): 0 
Gene Names: RpL4 (RpL1)
Find proteins for P09180 (Drosophila melanogaster)
Go to UniProtKB:  P09180
Entity ID: 75
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L40
Cm
52Drosophila melanogasterMutation(s): 0 
Gene Names: RpL40 (Ubi-f, UBI-F52)
Find proteins for P18101 (Drosophila melanogaster)
Go to UniProtKB:  P18101
Entity ID: 76
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L41
Cn
25Drosophila melanogasterMutation(s): 0 
Gene Names: RpL41
Find proteins for Q962S2 (Drosophila melanogaster)
Go to UniProtKB:  Q962S2
Entity ID: 77
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L37a
Cp
92Drosophila melanogasterMutation(s): 0 
Gene Names: RpL37A
Find proteins for Q9VMU4 (Drosophila melanogaster)
Go to UniProtKB:  Q9VMU4
Entity ID: 78
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L36A
Co
104Drosophila melanogasterMutation(s): 0 
Gene Names: RpL36A (anon-EST:fe1B2, Dmel\CG7424)
Find proteins for Q9VLT7 (Drosophila melanogaster)
Go to UniProtKB:  Q9VLT7
Entity ID: 79
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L11
CJ
184Drosophila melanogasterMutation(s): 0 
Gene Names: RpL11 (RPL11A)
Find proteins for P46222 (Drosophila melanogaster)
Go to UniProtKB:  P46222
Entity ID: 80
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L9
CH
190Drosophila melanogasterMutation(s): 0 
Gene Names: RpL9 (M(2)32D)
Find proteins for P50882 (Drosophila melanogaster)
Go to UniProtKB:  P50882
Entity ID: 81
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L6, isoform A
CE
243Drosophila melanogasterMutation(s): 0 
Gene Names: RpL6 (CG11522, Dmel\CG11522, Rp L6, RPL6, rpl6)
Find proteins for Q9V9W2 (Drosophila melanogaster)
Go to UniProtKB:  Q9V9W2
Entity ID: 82
MoleculeChainsSequence LengthOrganismDetails
60S ribosomal protein L7a
CG
271Drosophila melanogasterMutation(s): 0 
Gene Names: RpL7A (SURF-3)
Find proteins for P46223 (Drosophila melanogaster)
Go to UniProtKB:  P46223
Entity ID: 36
MoleculeChainsLengthOrganism
18S ribosomal RNAB21995Drosophila melanogaster
Entity ID: 37
MoleculeChainsLengthOrganism
E-tRNABC75Drosophila melanogaster
Entity ID: 83
MoleculeChainsLengthOrganism
28S ribosomal RNAA53970Drosophila melanogaster
Entity ID: 84
MoleculeChainsLengthOrganism
2S ribosomal RNAA930Drosophila melanogaster
Entity ID: 85
MoleculeChainsLengthOrganism
5S ribosomal RNAA7120Drosophila melanogaster
Entity ID: 86
MoleculeChainsLengthOrganism
5.8S ribosomal RNAA8123Drosophila melanogaster
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 6 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-07-09
    Type: Initial release
  • Version 1.1: 2014-12-10
    Type: Other
  • Version 1.2: 2015-04-08
    Type: Other
  • Version 1.3: 2018-07-18
    Type: Data collection