4RAE | pdb_00004rae

Crystal structure of Rv1600 encoded aminotransferase from Mycobacterium tuberculosis

• PDB DOI: https://doi.org/10.2210/pdb4RAE/pdb

• Classification: TRANSFERASE
• Organism(s): Mycobacterium tuberculosis H37Rv
• Expression System: Mycolicibacterium smegmatis
• Mutation(s): No 


• Deposited: 2014-09-10 Released: 2015-09-23 
• Deposition Author(s): Nasir, N., Anant, A., Vyas, R., Biswal, B.K.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.59 Å
• R-Value Free: 
  0.279 (Depositor), 0.280 (DCC) 
• R-Value Work: 
  0.239 (Depositor), 0.240 (DCC) 
• R-Value Observed: 
  0.241 (Depositor) 

Starting Model: experimental

Literature

Crystal structure of Rv1600 encoded aminotransferase from Mycobacterium tuberculosis

Nasir, N., Anant, A., Vyas, R., Biswal, B.K.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 84.56 kDa 
• Atom Count: 5,530 
• Modeled Residue Count: 732 
• Deposited Residue Count: 788 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Histidinol-phosphate aminotransferase	A, B	394	Mycobacterium tuberculosis H37Rv	Mutation(s): 0  Gene Names: hisC EC: 2.6.1.9
UniProt
Find proteins for P9WML7 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WML7  Go to UniProtKB:  P9WML7

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.59 Å
• R-Value Free:  0.279 (Depositor), 0.280 (DCC) 
• R-Value Work:  0.239 (Depositor), 0.240 (DCC) 
• R-Value Observed: 0.241 (Depositor) 

Space Group: P 3₂ 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 159.937	α = 90
b = 159.937	β = 90
c = 110.317	γ = 120

Software Package:

Software Name	Purpose
StructureStudio	data collection
PHASER	phasing
REFMAC	refinement
HKL-2000	data reduction
SCALEPACK	data scaling

Structure Validation

Entry History 

Deposition Data

• Released Date: 2015-09-23 
Deposition Author(s): Nasir, N., Anant, A., Vyas, R., Biswal, B.K.

Revision History  

• Version 1.0: 2015-09-23
  Type: Initial release
  
• Version 1.1: 2023-11-08
  Changes: Data collection, Database references, Refinement description