4R1Q

Crystal Structure of Thermophilic Geobacillus kaustophilus L-Arabinose isomerase in complex with L-arabitol


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.248 Å
  • R-Value Free: 0.201 
  • R-Value Work: 0.154 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal Structure of Thermophilic L-Arabinose Isomerase with L-Arabitol from Geobacillus kaustophilus

Choi, J.M.Lee, Y.J.Lee, D.W.Lee, S.H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
L-arabinose isomerase
A, B, C, D, E, F
497Geobacillus kaustophilus (strain HTA426)Mutation(s): 0 
Gene Names: araA
EC: 5.3.1.4
Find proteins for Q5KYP7 (Geobacillus kaustophilus (strain HTA426))
Go to UniProtKB:  Q5KYP7
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MN
Query on MN

Download SDF File 
Download CCD File 
A, B, C, D, E, F
MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
 Ligand Interaction
SST
Query on SST

Download SDF File 
Download CCD File 
A, B, C, E
L-arabinitol
(2S,4S)-pentane-1,2,3,4,5-pentol
C5 H12 O5
HEBKCHPVOIAQTA-IMJSIDKUSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.248 Å
  • R-Value Free: 0.201 
  • R-Value Work: 0.154 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 118.514α = 90.00
b = 146.263β = 90.00
c = 215.677γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling
MOLREPphasing
HKL-2000data collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2015-08-12
    Type: Initial release
  • Version 1.1: 2015-10-21
    Type: Structure summary