Crystal structure of a Function Uncharacterized Domain of E3 Ubiquitin Ligase SHPRH
Zhang, Q., Dong, A., Li, Y., Walker, J.R., Guan, X., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Tong, Y.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
E3 ubiquitin-protein ligase SHPRH | 420 | Homo sapiens | Mutation(s): 0  Gene Names: SHPRH, KIAA2023 EC: 3.6.4 (UniProt), 2.3.2.27 (UniProt) | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q149N8 (Homo sapiens) Explore Q149N8  Go to UniProtKB:  Q149N8 | |||||
PHAROS:  Q149N8 GTEx:  ENSG00000146414  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q149N8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | C [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
ZN Query on ZN | B [auth A] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
UNX Query on UNX | D [auth A] | UNKNOWN ATOM OR ION X |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
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a = 130.624 | α = 90 |
b = 130.624 | β = 90 |
c = 129.571 | γ = 120 |
Software Name | Purpose |
---|---|
DENZO | data reduction |
SCALEPACK | data scaling |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
SBC-Collect | data collection |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
SOLVE | phasing |
BUSTER | refinement |