4PAV

Structure of hypothetical protein SA1046 from S. aureus.

• PDB DOI: https://doi.org/10.2210/pdb4PAV/pdb

• Classification: UNKNOWN FUNCTION
• Organism(s): Staphylococcus aureus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2014-04-10 Released: 2015-05-06 
• Deposition Author(s): Battaile, K.P., Mulichak, A., Lam, R., Lam, K., Soloveychik, M., Romanov, V., Jones, K., Pai, E.F., Chirgadze, N.Y.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.30 Å
• R-Value Free: 0.226 
• R-Value Work: 0.201 
• R-Value Observed: 0.203 

Literature

Structure of hypothetical protein SA1046 from S. aureus.

Battaile, K.P., Mulichak, A., Lam, R., Lam, K., Soloveychik, M., Romanov, V., Jones, K., Pai, E.F., Chirgadze, N.Y.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors.

Biological Assembly 3  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 3 assigned by authors.

Biological Assembly 4  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 4 assigned by authors.

Biological Assembly 5  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 5 assigned by authors.

Biological Assembly 6  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 6 assigned by authors.

Biological Assembly 7  

Global Symmetry: Tetrahedral - T  (Explore in 3D)
Global Stoichiometry: Homo 12-mer - A12 

Biological assembly 7 generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 100.35 kDa 
• Atom Count: 6,095 
• Modelled Residue Count: 755 
• Deposited Residue Count: 870 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Glyoxalase family protein	A, B, C, D, E, F	145	Staphylococcus aureus	Mutation(s): 0

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A, B, C, D, E, F	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.30 Å
• R-Value Free: 0.226 
• R-Value Work: 0.201 
• R-Value Observed: 0.203 
• Space Group: P 3₂ 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 96.65	α = 90
b = 96.65	β = 90
c = 204.12	γ = 120

Software Package:

Software Name	Purpose
BUSTER	refinement

Structure Validation

Entry History 

Deposition Data

• Released Date: 2015-05-06 
Deposition Author(s): Battaile, K.P., Mulichak, A., Lam, R., Lam, K., Soloveychik, M., Romanov, V., Jones, K., Pai, E.F., Chirgadze, N.Y.

Revision History  

• Version 1.0: 2015-05-06
  Type: Initial release
  
• Version 1.1: 2023-12-27
  Changes: Data collection, Database references, Derived calculations, Other, Refinement description, Source and taxonomy
• Version 1.2: 2024-10-23
  Changes: Structure summary