4P0F

Cleaved Serpin 42Da (C 2 2 21)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.188 
  • R-Value Work: 0.166 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

High resolution structure of cleaved Serpin 42 Da from Drosophila melanogaster.

Ellisdon, A.M.Zhang, Q.Henstridge, M.A.Johnson, T.K.Warr, C.G.Law, R.H.Whisstock, J.C.

(2014) Bmc Struct.Biol. 14: 14-14

  • DOI: 10.1186/1472-6807-14-14
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • The Drosophila melanogaster Serpin 42 Da gene (previously Serpin 4) encodes a serine protease inhibitor that is capable of remarkable functional diversity through the alternative splicing of four different reactive centre loop exons. Eight protein is ...

    The Drosophila melanogaster Serpin 42 Da gene (previously Serpin 4) encodes a serine protease inhibitor that is capable of remarkable functional diversity through the alternative splicing of four different reactive centre loop exons. Eight protein isoforms of Serpin 42 Da have been identified to date, targeting the protease inhibitor to both different proteases and cellular locations. Biochemical and genetic studies suggest that Serpin 42 Da inhibits target proteases through the classical serpin 'suicide' inhibition mechanism, however the crystal structure of a representative Serpin 42 Da isoform remains to be determined.


    Organizational Affiliation

    Department of Biochemistry and Molecular Biology, Monash University, Clayton, VIC 3800, Australia. james.whisstock@monash.edu.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Serine protease inhibitor 4, isoform B
A
393Drosophila melanogasterMutation(s): 0 
Gene Names: Spn42Da (Dmel\CG9453, dSerp2, Serp2, Sp4, sp4, Spn4, spn4, Spn4A)
Find proteins for Q7K8Y5 (Drosophila melanogaster)
Go to UniProtKB:  Q7K8Y5
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.188 
  • R-Value Work: 0.166 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 59.740α = 90.00
b = 125.950β = 90.00
c = 119.940γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-05-07
    Type: Initial release
  • Version 1.1: 2014-05-21
    Type: Data collection