4OSE | pdb_00004ose

X-ray Crystal Structure of a Putative Hydrolase from Rickettsia typhi

PDB DOI: https://doi.org/10.2210/pdb4OSE/pdb

Classification: HYDROLASE
Organism(s): Rickettsia typhi str. Wilmington
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2014-02-12 Released: 2014-03-19
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.40 Å
R-Value Free:
0.235 (Depositor), 0.238 (DCC)
R-Value Work:
0.201 (Depositor), 0.208 (DCC)
R-Value Observed:
0.203 (Depositor)

Starting Model: experimental
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This is version 1.2 of the entry. See complete history.

Literature

X-ray Crystal Structure of a Putative Hydrolase from Rickettsia typhi

Fairman, J.W., Abendroth, J., Edwards, T.E., Lorimer, D.

To be published.

Macromolecule Content

Total Structure Weight: 69.13 kDa
Atom Count: 4,463
Modeled Residue Count: 567
Deposited Residue Count: 596
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Putative Hydrolase	A, B	298	Rickettsia typhi str. Wilmington	Mutation(s): 0 Gene Names: RT0431
UniProt
Find proteins for Q68WT4 (Rickettsia typhi (strain ATCC VR-144 / Wilmington)) Explore Q68WT4 Go to UniProtKB: Q68WT4
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	Q68WT4
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.40 Å
R-Value Free: 0.235 (Depositor), 0.238 (DCC)
R-Value Work: 0.201 (Depositor), 0.208 (DCC)
R-Value Observed: 0.203 (Depositor)

Diffraction Data:

Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 154.92	α = 90
b = 49.06	β = 94.77
c = 87.29	γ = 90

Software Package:

Software Name	Purpose
XSCALE	data scaling
PHENIX	refinement
PDB_EXTRACT	data extraction
XDS	data reduction
BALBES	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2014-03-19

Deposition Author(s):

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History (Full details and data files)

Version 1.0: 2014-03-19
Type: Initial release
Version 1.1: 2017-10-11
Changes: Data collection
Version 1.2: 2023-09-20
Changes: Data collection, Database references, Refinement description

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.