4NAC

Crystal Structure of the N-terminal Domain of p15RS

PDB DOI: https://doi.org/10.2210/pdb4NAC/pdb

Classification: TRANSCRIPTION
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2013-10-22 Released: 2013-12-11
Deposition Author(s): Mei, K., Jin, Z., Ren, F., Wang, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free: 0.214
R-Value Work: 0.174
R-Value Observed: 0.176

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Crystal Structure of the N-terminal Domain of p15RS

Mei, K., Jin, Z., Ren, F., Wang, Y., Chang, Z., Wang, X.

To be published.

Macromolecule Content

Total Structure Weight: 32.64 kDa
Atom Count: 2,427
Modelled Residue Count: 267
Deposited Residue Count: 278
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Regulation of nuclear pre-mRNA domain-containing protein 1A	A, B	139	Homo sapiens	Mutation(s): 0 Gene Names: P15RS, RPRD1A
UniProt & NIH Common Fund Data Resources
Find proteins for Q96P16 (Homo sapiens) Explore Q96P16 Go to UniProtKB: Q96P16
PHAROS: Q96P16 GTEx: ENSG00000141425
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q96P16
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.00 Å
R-Value Free: 0.214
R-Value Work: 0.174
R-Value Observed: 0.176
Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 43.691	α = 90
b = 47.326	β = 100.24
c = 68.019	γ = 90

Software Package:

Software Name	Purpose
DENZO	data reduction
SCALEPACK	data scaling
PHENIX	refinement
PDB_EXTRACT	data extraction
HKL-2000	data collection
HKL-2000	data reduction
HKL-2000	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2013-12-11

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2013-12-11
Type: Initial release
Version 1.1: 2017-11-15
Changes: Refinement description
Version 1.2: 2024-03-20
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.