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Musille, P.M., Ortlund, E.A.(2014) Acta Crystallogr Sect F Struct Biol Cryst Commun
4MCA
Crystal Structure of Glycerol Dehydrogenase from Serratia to 1.9A
- DOI: 10.2210/pdb4MCA/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Serratia plymuthica A30
- Mutation(s): No
- Deposited: 2013-08-21 Released: 2014-02-12
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.215
- R-Value Work: 0.177
- R-Value Observed: 0.179
wwPDB Validation 3D Report Full Report
Literature
Macromolecules
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | A, B | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | Ligand Interaction | |
| ZN Query on ZN | A, B | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | Ligand Interaction | |
| NA Query on NA | A, B | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.215
- R-Value Work: 0.177
- R-Value Observed: 0.179
- Space Group: I 4 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 117.507 | α = 90 |
| b = 117.507 | β = 90 |
| c = 259.863 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SCALEPACK | data scaling |
| PHASER | phasing |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| SERGUI | data collection |
| HKL-2000 | data reduction |
Entry History
Deposition Data
- Deposited Date: 2013-08-21
- Released Date: 2014-02-12 Deposition Author(s): Musille, P.M., Ortlund, E.A.
