Macromolecule Content

Total Structure Weight: 168.34 kDa
Atom Count: 11613
Modelled Residue Count: 1483
Deposited Residue Count: 1540
Unique protein chains: 1

4M9A

Crystal structure of Acyl-coA dehydrogenase from Burkholderia thailandensis E264

PDB DOI: 10.2210/pdb4M9A/pdb

Classification: OXIDOREDUCTASE
Organism(s): Burkholderia thailandensis E264
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2013-08-14 Released: 2013-11-13
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.20 Å
R-Value Free: 0.232
R-Value Work: 0.186
R-Value Observed: 0.189

wwPDB Validation 3D Report Full Report

Ligand Structure Quality Assessment

This is version 1.0 of the entry. See complete history.

Literature

Crystal structure of Acyl-coA dehydrogenase from Burkholderia thailandensis E264

Lukacs, C.M., Fairman, J.W., Edwards, T.E., Lorimer, D.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Acyl-CoA dehydrogenase	A, B, C, D	385	Burkholderia thailandensis E264	Mutation(s): 0 Gene Names: BTH_II1803 EC: 1.3.99
UniProt
Find proteins for Q2T4A2 (Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CIP 106301 / E264)) Explore Q2T4A2 Go to UniProtKB: Q2T4A2
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q2T4A2
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
FDA Query on FDA Download Ideal Coordinates CCD File SDF format, chain E [auth B] MOL2 format, chain E [auth B]	E [auth B]	DIHYDROFLAVINE-ADENINE DINUCLEOTIDE C₂₇ H₃₅ N₉ O₁₅ P₂ YPZRHBJKEMOYQH-UYBVJOGSSA-N		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.20 Å
R-Value Free: 0.232
R-Value Work: 0.186
R-Value Observed: 0.189
Space Group: P 2₁ 2₁ 2₁
Diffraction Data DOI: 10.18430/M34M9A Protein Diffraction

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 87.26	α = 90
b = 111	β = 90
c = 170.25	γ = 90

Software Package:

Software Name	Purpose
PHASER	phasing
REFMAC	refinement
XDS	data reduction
XSCALE	data scaling

Structure Validation

View Full Validation Report

Ligand Structure Quality Assessment

Entry History

Deposition Data

Deposited Date: 2013-08-14
Released Date: 2013-11-13

Deposition Author(s):

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History (Full details and data files)

Version 1.0: 2013-11-13
Type: Initial release

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.