4IQZ

The crystal structure of a large insert in RNA polymerase (RpoC) subunit from E. coli


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.240 
  • R-Value Work: 0.203 
  • R-Value Observed: 0.205 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

The crystal structure of a large insert in RNA polymerase (RpoC) subunit from E. coli

Bhandari, V.Sugiman-Marangos, S.N.Naushad, H.S.Gupta, R.S.Junop, M.S.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
DNA-directed RNA polymerase subunit beta'A, B, C, D, E250Escherichia coli K-12Mutation(s): 1 
Gene Names: b3988JW3951rpoCRPOC subunit beta'tabB
EC: 2.7.7.6
Find proteins for P0A8T7 (Escherichia coli (strain K12))
Explore P0A8T7 
Go to UniProtKB:  P0A8T7
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
IOD
Query on IOD

Download Ideal Coordinates CCD File 
AA [auth B] , AB [auth D] , BA [auth B] , BB [auth D] , CA [auth B] , CB [auth D] , DA [auth B] , DB [auth D] , 
AA [auth B],  AB [auth D],  BA [auth B],  BB [auth D],  CA [auth B],  CB [auth D],  DA [auth B],  DB [auth D],  EA [auth B],  EB [auth D],  F [auth A],  FA [auth B],  FB [auth D],  G [auth A],  GA [auth B],  GB [auth D],  H [auth A],  HA [auth B],  HB [auth D],  I [auth A],  IA [auth B],  IB [auth D],  J [auth A],  JB [auth D],  K [auth A],  KA [auth C],  L [auth A],  LA [auth C],  LB [auth E],  M [auth A],  MA [auth C],  MB [auth E],  N [auth A],  NA [auth C],  NB [auth E],  O [auth A],  OA [auth C],  OB [auth E],  P [auth A],  PA [auth C],  Q [auth A],  QA [auth C],  R [auth A],  RA [auth C],  S [auth A],  SA [auth C],  T [auth A],  TA [auth C],  UA [auth C],  W [auth B],  X [auth B],  XA [auth D],  Y [auth B],  YA [auth D],  Z [auth B],  ZA [auth D]
IODIDE ION
I
XMBWDFGMSWQBCA-UHFFFAOYSA-M
 Ligand Interaction
NA
Query on NA

Download Ideal Coordinates CCD File 
JA [auth B], KB [auth D], PB [auth E], U [auth A], V [auth A], VA [auth C], WA [auth C]SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D, EL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.240 
  • R-Value Work: 0.203 
  • R-Value Observed: 0.205 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 198.06α = 90
b = 65.63β = 108.92
c = 81.292γ = 90
Software Package:
Software NamePurpose
CBASSdata collection
PHENIXmodel building
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling
PHENIXphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2013-02-13
    Type: Initial release