4HI2

Crystal structure of an Acylphosphatase protein cage


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.10 Å
  • R-Value Free: 0.289 
  • R-Value Work: 0.221 
  • R-Value Observed: 0.224 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Crystal structure of acylphosphatase C20R mutant from Vibrio cholerae0395

Nath, S.Banerjee, R.Sen, U.

(2013) J Mol Biol 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Acylphosphatase
A, B, C, D, E, F, G, H, I, J, K, L
A, B, C, D, E, F, G, H, I, J, K, L
91Vibrio cholerae O395Mutation(s): 0 
Gene Names: acyPVC0395_A0969VC395_1474
EC: 3.6.1.7
UniProt
Find proteins for A5F8G9 (Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395))
Explore A5F8G9 
Go to UniProtKB:  A5F8G9
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA5F8G9
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SO4
Query on SO4

Download Ideal Coordinates CCD File 
AA [auth D],
AB [auth L],
BA [auth D],
BB [auth L],
CA [auth E],
AA [auth D],
AB [auth L],
BA [auth D],
BB [auth L],
CA [auth E],
CB [auth L],
DA [auth E],
EA [auth E],
FA [auth E],
GA [auth F],
HA [auth F],
IA [auth F],
JA [auth G],
KA [auth G],
LA [auth G],
M [auth A],
MA [auth G],
N [auth A],
NA [auth H],
O [auth A],
OA [auth H],
P [auth A],
PA [auth H],
Q [auth B],
QA [auth I],
R [auth B],
RA [auth I],
S [auth B],
SA [auth I],
T [auth B],
TA [auth J],
U [auth B],
UA [auth J],
V [auth C],
VA [auth J],
W [auth C],
WA [auth J],
X [auth C],
XA [auth K],
Y [auth C],
YA [auth K],
Z [auth D],
ZA [auth K]
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.10 Å
  • R-Value Free: 0.289 
  • R-Value Work: 0.221 
  • R-Value Observed: 0.224 
  • Space Group: P 31
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 104.94α = 90
b = 104.94β = 90
c = 147.811γ = 120
Software Package:
Software NamePurpose
MAR345dtbdata collection
PHASERphasing
PHENIXrefinement
iMOSFLMdata reduction
SCALAdata scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2013-09-25
    Type: Initial release