Download MendeleyCrystal structure of acylphosphatase C20R mutant from Vibrio cholerae0395
Nath, S., Banerjee, R., Sen, U.(2013) J Mol Biol
4HI1
Crystal structure of acylphosphatase C20R mutant from Vibrio cholerae0395
- PDB DOI: https://doi.org/10.2210/pdb4HI1/pdb
- Classification: HYDROLASE
- Organism(s): Vibrio cholerae O395
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): Yes
- Deposited: 2012-10-11 Released: 2013-09-25
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.96 Å
- R-Value Free: 0.249
- R-Value Work: 0.187
- R-Value Observed: 0.191
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Acylphosphatase | 91 | Vibrio cholerae O395 | Mutation(s): 1 Gene Names: acyP, VC0395_A0969, VC395_1474 EC: 3.6.1.7 |  | |
UniProt | |||||
Find proteins for A5F8G9 (Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)) Explore A5F8G9 Go to UniProtKB: A5F8G9 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A5F8G9 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MOO Query on MOO | D [auth A], F [auth B], I [auth C] | MOLYBDATE ION Mo O4 MEFBJEMVZONFCJ-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | E [auth A], G [auth B], H [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.96 Å
- R-Value Free: 0.249
- R-Value Work: 0.187
- R-Value Observed: 0.191
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 39.71 | α = 90 |
| b = 81.3 | β = 90.52 |
| c = 40.53 | γ = 90 |
| Software Name | Purpose |
|---|---|
| MAR345dtb | data collection |
| PHASER | phasing |
| PHENIX | refinement |
| iMOSFLM | data reduction |
| SCALA | data scaling |
Entry History
Deposition Data
- Released Date: 2013-09-25 Deposition Author(s): Nath, S., Banerjee, R., Sen, U.
Revision History (Full details and data files)
- Version 1.0: 2013-09-25
Type: Initial release - Version 1.1: 2023-09-20
Changes: Data collection, Database references, Derived calculations, Refinement description
