4GLT | pdb_00004glt

Crystal structure of glutathione s-transferase MFLA_2116 (target EFI-507160) from methylobacillus flagellatus kt with gsh bound

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 
    0.283 (Depositor), 0.269 (DCC) 
  • R-Value Work: 
    0.209 (Depositor), 0.204 (DCC) 
  • R-Value Observed: 
    0.211 (Depositor) 

Starting Model: experimental
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This is version 1.2 of the entry. See complete history. 

Literature

Crystal structure of glutathione s-transferase MFLA_2116 (target EFI-507160) from methylobacillus flagellatus kt with gsh bound

Patskovsky, Y., Toro, R., Bhosle, R., Zencheck, W.D., Hillerich, B., Seidel, R.D., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Imker, H.J., Armstrong, R.N., Gerlt, J.A., Almo, S.C.

To be published.

Macromolecule Content 

  • Total Structure Weight: 103.46 kDa 
  • Atom Count: 6,667 
  • Modeled Residue Count: 821 
  • Deposited Residue Count: 900 
  • Unique protein chains: 1

Macromolecules

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Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Glutathione S-transferase-like protein
A, B, C, D
225Methylobacillus flagellatus KTMutation(s): 0 
Gene Names: Mfla_2116
UniProt
Find proteins for Q1GZF4 (Methylobacillus flagellatus (strain ATCC 51484 / DSM 6875 / VKM B-1610 / KT))
Explore Q1GZF4 
Go to UniProtKB:  Q1GZF4
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ1GZF4
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free:  0.283 (Depositor), 0.269 (DCC) 
  • R-Value Work:  0.209 (Depositor), 0.204 (DCC) 
  • R-Value Observed: 0.211 (Depositor) 
Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 54.815α = 90
b = 97.024β = 105.38
c = 81.868γ = 90
Software Package:
Software NamePurpose
PHASERphasing
REFMACrefinement
HKL-3000data reduction
HKL-3000data scaling

Structure Validation

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Ligand Structure Quality Assessment 


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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2012-08-29
    Type: Initial release
  • Version 1.1: 2018-01-24
    Changes: Structure summary
  • Version 1.2: 2023-09-13
    Changes: Data collection, Database references, Derived calculations, Refinement description