4FKB

An Organic solvent tolerant lipase 42


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.22 Å
  • R-Value Free: 0.165 
  • R-Value Work: 0.127 
  • R-Value Observed: 0.129 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

An Organic solvent tolerant lipase 42

Zaliha, R.N.Rahman, R.N.Khusaini, M.S.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Thermostable organic solvent tolerant lipaseA, B388Bacillus sp. 42Mutation(s): 2 
EC: 3.1.1.3
Membrane Entity: Yes 
UniProt
Find proteins for Q5U780 (Bacillus sp)
Explore Q5U780 
Go to UniProtKB:  Q5U780
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 5 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download Ideal Coordinates CCD File 
CA [auth B] , D [auth A] , DA [auth B] , E [auth A] , EA [auth B] , FA [auth B] , GA [auth B] , HA [auth B] , 
CA [auth B], D [auth A], DA [auth B], E [auth A], EA [auth B], FA [auth B], GA [auth B], HA [auth B], IA [auth B], J [auth A], JA [auth B], K [auth A], KA [auth B], L [auth A], LA [auth B], M [auth A], MA [auth B], N [auth A], NA [auth B], O [auth A], P [auth A]
GLYCEROL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
ZN
Query on ZN

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C [auth A], W [auth B]ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
CA
Query on CA

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TA [auth B], V [auth A]CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
CL
Query on CL

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OA [auth B] , PA [auth B] , Q [auth A] , QA [auth B] , R [auth A] , RA [auth B] , S [auth A] , SA [auth B] , 
OA [auth B], PA [auth B], Q [auth A], QA [auth B], R [auth A], RA [auth B], S [auth A], SA [auth B], T [auth A], U [auth A]
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
NA
Query on NA

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AA [auth B] , BA [auth B] , F [auth A] , G [auth A] , H [auth A] , I [auth A] , X [auth B] , Y [auth B] , 
AA [auth B], BA [auth B], F [auth A], G [auth A], H [auth A], I [auth A], X [auth B], Y [auth B], Z [auth B]
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.22 Å
  • R-Value Free: 0.165 
  • R-Value Work: 0.127 
  • R-Value Observed: 0.129 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 117.824α = 90
b = 81.001β = 96.69
c = 99.529γ = 90
Software Package:
Software NamePurpose
HKL-2000data collection
SHELXSphasing
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

View Full Validation Report




Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2013-06-19
    Type: Initial release