4FGM

Crystal structure of the aminopeptidase N family protein Q5QTY1 from Idiomarina loihiensis. Northeast Structural Genomics Consortium Target IlR60.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.394 Å
  • R-Value Free: 0.209 
  • R-Value Work: 0.190 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of the aminopeptidase N family protein Q5QTY1 from Idiomarina loihiensis.

Vorobiev, S.Su, M.Tong, T.Kohan, E.Wang, D.Everett, J.K.Acton, T.B.Montelione, G.T.Tong, L.Hunt, J.F.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Aminopeptidase N family protein
A
597Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)Mutation(s): 0 
Find proteins for Q5QTY1 (Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR))
Go to UniProtKB:  Q5QTY1
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
MAE
Query on MAE

Download SDF File 
Download CCD File 
A
MALEIC ACID
C4 H4 O4
VZCYOOQTPOCHFL-UPHRSURJSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.394 Å
  • R-Value Free: 0.209 
  • R-Value Work: 0.190 
  • Space Group: P 62 2 2
Unit Cell:
Length (Å)Angle (°)
a = 119.657α = 90.00
b = 119.657β = 90.00
c = 220.134γ = 120.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
HKL-2000data reduction
HKL-2000data scaling
PHENIXrefinement
Blu-Icedata collection
SHELXDEphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2012-08-01
    Type: Initial release
  • Version 1.1: 2017-10-25
    Type: Author supporting evidence