4F34 | pdb_00004f34

Symfoil-4V synthetic protein with T30E/T72E/T116E mutations, and delta His tag

PDB DOI: https://doi.org/10.2210/pdb4F34/pdb

Classification: UNKNOWN FUNCTION
Organism(s): synthetic construct
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2012-05-08 Released: 2013-05-08
Deposition Author(s): Blaber, M., Xia, X.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.95 Å
R-Value Free:
0.241 (Depositor), 0.230 (DCC)
R-Value Work:
0.198 (Depositor), 0.190 (DCC)
R-Value Observed:
0.201 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Symfoil-4V synthetic protein with T30E/T72E/T116E mutations, and delta His tag

Blaber, M., Xia, X.

To be published.

Macromolecule Content

Total Structure Weight: 60.5 kDa
Atom Count: 4,161
Modeled Residue Count: 492
Deposited Residue Count: 544
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
de novo protein Symfoil-4V	A, B, C, D	136	synthetic construct	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.95 Å
R-Value Free: 0.241 (Depositor), 0.230 (DCC)
R-Value Work: 0.198 (Depositor), 0.190 (DCC)
R-Value Observed: 0.201 (Depositor)

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 57.402	α = 90
b = 70.3	β = 90
c = 122.179	γ = 90

Software Package:

Software Name	Purpose
CrystalClear	data collection
PHASES	phasing
PHENIX	refinement
DENZO	data reduction
SCALEPACK	data scaling

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2013-05-08

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2013-05-08
Type: Initial release
Version 1.1: 2024-02-28
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.